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Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

201-220 / 238 show all
PubmedHPO Human phenotype annotation to PubMed abstracts, based on the HPO ontology12.4 MTudor Grozatudor2023-11-24Beta
PubTator4TogoVar 198 KPubTatorYasunori Yamamoto2024-01-10Developing
pubtator-sample Sample annotation of PubTator produced by Zhiyong Lu et al.28Zhiyong LuJin-Dong Kim2023-11-27Testing
relna https://www.tagtog.net/jmcejuela/relna2.77 KAshish Baghudana and Juan Miguel Cejuelatagtog2023-11-29Developing
sentences Sentence segmentation annotation. Automatic annotation by TextSentencer.6.96 MDBCLSJin-Dong Kim2023-11-24Developing
silkworm 9.87 KMasakazu SAGA2023-11-29Testing
silkworm_phenotype 3.86 Kshigen2023-11-29Developing
silkworm_test test project457yaguchi2023-11-29Testing
SMAFIRA_Methods Predictions for methods for the SMAFIRA project.0zebet2023-11-28Developing
sonoma _19.3 KStandigm2023-11-24Testing
sonoma2 sonoma29.09 KStandigmchanung2023-11-29Beta
spacy-test Random set of articles used for testing in the development of the RESTful spaCy parsing web service. Since development is now finished, they are released for the community to use.131 KNico ColicNico Colic2023-11-29Released
SPECIES800_autotagged This project comprises the SPECIES800 corpus documents automatically annotated by the Jensenlab tagger. Annotated entity types are: Genes/proteins from the mentioned organisms (and any human ones) PubChem Compound identifiers NCBI Taxonomy entries Gene Ontology cellular component terms BRENDA Tissue Ontology terms Disease Ontology terms Environment Ontology terms The SPECIES 800 (S800) comprises 800 PubMed abstracts. In its original form species mentions were manually identified and mapped to the corresponding NCBI Taxonomy identifiers. Described in: The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text. Pafilis E, Frankild SP, Fanini L, Faulwetter S, Pavloudi C, et al. (2013). PLoS ONE, 2013, 8(6): e65390. doi:10.1371/journal.pone.0065390. The manually annotated corpus is also available as a PubAnnotation project (see here). 0Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensenevangelos2015-11-20Testing
speech-test 6Jin-Dong Kim2023-11-26Testing
tees-test Random PMC document used for testing during the development of a RESTful TEES parsing web service.3.39 KNico ColicNico Colic2023-11-24Developing
TEST0 3.37 MYue Wang2023-11-24
test-210614 17.8 KJin-Dong Kim2024-01-05Testing
TEST-CellLine Annotation: AnnotationByCellosaurus76Yasunori Yamamoto2023-11-29Testing
TEST-ChemicalEntity ChemicalEntity : Annotated by PD-MeSH2022_CHEBI_tuned-B827yucca2023-11-29Beta
TEST-DiseaseOrPhenotypicFeature Annotated by Mesh_All_FN795Eisuke Dohi2023-11-29Released
Name T# Ann.AuthorMaintainerUpdated_atStatus

201-220 / 238 show all
PubmedHPO 12.4 MTudor Grozatudor2023-11-24Beta
PubTator4TogoVar 198 KPubTatorYasunori Yamamoto2024-01-10Developing
pubtator-sample 28Zhiyong LuJin-Dong Kim2023-11-27Testing
relna 2.77 KAshish Baghudana and Juan Miguel Cejuelatagtog2023-11-29Developing
sentences 6.96 MDBCLSJin-Dong Kim2023-11-24Developing
silkworm 9.87 KMasakazu SAGA2023-11-29Testing
silkworm_phenotype 3.86 Kshigen2023-11-29Developing
silkworm_test 457yaguchi2023-11-29Testing
SMAFIRA_Methods 0zebet2023-11-28Developing
sonoma 19.3 KStandigm2023-11-24Testing
sonoma2 9.09 KStandigmchanung2023-11-29Beta
spacy-test 131 KNico ColicNico Colic2023-11-29Released
SPECIES800_autotagged 0Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensenevangelos2015-11-20Testing
speech-test 6Jin-Dong Kim2023-11-26Testing
tees-test 3.39 KNico ColicNico Colic2023-11-24Developing
TEST0 3.37 MYue Wang2023-11-24
test-210614 17.8 KJin-Dong Kim2024-01-05Testing
TEST-CellLine 76Yasunori Yamamoto2023-11-29Testing
TEST-ChemicalEntity 827yucca2023-11-29Beta
TEST-DiseaseOrPhenotypicFeature 795Eisuke Dohi2023-11-29Released