| 0mytest | | | 144 | 2023-11-29 | | |
| bionlp-st-pc-2013-training | | The training dataset from the pathway curation (PC) task in the BioNLP Shared Task 2013.
The entity types defined in the PC task are simple chemical, gene or gene product, complex and cellular component. | 7.86 K | 2023-11-27 | Released | |
| AIMed | | The AIMed corpus is one of the most widely used corpora for protein-protein interaction extraction. The protein annotations are either parts of the protein interaction annotations, or are uninvolved in any protein interaction annotation.
Publication: http://www.cs.utexas.edu/~ml/papers/bionlp-aimed-04.pdf | 4.04 K | 2023-11-27 | Testing | |
| SCAI-Test | | A small corpus for the evaluation of dictionaries containing chemical entities.
Publication: http://www.scai.fraunhofer.de/fileadmin/images/bio/data_mining/paper/kolarik2008.pdf
Original source: https://www.scai.fraunhofer.de/en/business-research-areas/bioinformatics/downloads/corpora-for-chemical-entity-recognition.html | 1.21 K | 2023-11-28 | Released | |
| bionlp-st-epi-2011-training | | The training dataset from the Epigenetics and Post-translational Modifications (EPI) task in the BioNLP Shared Task 2011.
The core entities of the task are genes and gene products (RNA and proteins), identified in the data simply as "Protein" annotations. | 7.59 K | 2023-11-29 | Released | |
| DisGeNET5_variant_disease | | The file contains variant-disease associations obtained by text mining MEDLINE abstracts using the BeFree system, including the variant and disease off sets. | 144 K | 2023-11-24 | Released | |
| OryzaGP | | A dataset for Named Entity Recognition for rice gene | 29.1 K | 2023-11-24 | Uploading | |
| PIR-corpus1 | | The Protein Information Resource (PIR) is not biased towards any particular biomedical domain, and is expected to provide more diverse protein names in a given sample size.
Annotation category: protein, compound-protein, acronym. | 4.44 K | 2023-11-27 | Released | |
| funRiceGenes-exact | | | 841 | 2023-11-28 | Developing | |
| 2_test | | | 145 M | 2023-11-24 | | |
