| bionlp-ost-19-BB-norm-ner-train | | | 2.45 K | | ldeleger | 2023-11-29 | Developing | |
| pubmed_test | | | 0 | | | 2023-11-29 | | |
| GENIAcorpus | | multi_cell (1,782)
mono_cell (222)
virus (2,136)
protein_family_or_group (8,002)
protein_complex (2,394)
protein_molecule (21,290)
protein_subunit (942)
protein_substructure (129)
protein_domain_or_region (1,044)
protein_other (97)
peptide (521)
amino_acid_monomer (784)
DNA_family_or_group (332)
DNA_molecule (664)
DNA_substructure (2)
DNA_domain_or_region (39)
DNA_other (16)
RNA_family_or_group (1,545)
RNA_molecule (554)
RNA_substructure (106)
RNA_domain_or_region (8,237)
RNA_other (48)
polynucleotide (259)
nucleotide (243)
lipid (2,375)
carbohydrate (99)
other_organic_compound (4,113)
body_part (461)
tissue (706)
cell_type (7,473)
cell_component (679)
cell_line (4,129)
other_artificial_source (211)
inorganic (258)
atom (342)
other (21,056)
| 78.9 K | GENIA Project | Yue Wang | 2023-11-29 | Released | |
| MicrobeTaxon | | | 1.23 K | | Yo Shidahara | 2023-11-26 | Testing | |
| GlycoBiology-NCBITAXON | | NCBITAXON-based annotation to GlycoBiology abstracts | 32.7 K | | shuo50 | 2023-11-29 | Testing | |
| Erin_test | | @ Yonsei University | 0 | Erin | ErinHJ_Kim | 2023-11-29 | Testing | |
| DocumentLevelAnnotationSample | | A sample project for document level annotation | 47 | | Jin-Dong Kim | 2023-11-29 | Testing | |
| Training_Data_Portuguese_pt_en | | | 0 | | wmtbio | 2023-11-29 | Developing | |
| silkwormbase | | | 10 K | | sakaniwa | 2023-11-29 | Testing | |
| semrep-sample | | Sample annotation of SemRep, produced by Rindflesch, et al.
Rindflesch, T.C. and Fiszman, M. (2003). The interaction of domain knowledge and linguistic structure in natural language processing: interpreting hypernymic propositions in biomedical text. Journal of Biomedical Informatics, 36(6):462-477. | 11.1 K | Rindflesch et al. | Jin-Dong Kim | 2023-11-29 | Testing | |
| bionlp-ost-19-BB-rel-ner-test | | | 125 | | ldeleger | 2023-11-24 | Developing | |
| test1 | | test1 | 21 | H. S. Park | Sophie Nam | 2023-11-26 | Testing | |
| tagtog-demo | | demo documents produced by tagtog annotations | 262 | | tagtog | 2023-11-27 | Developing | |
| 2015-BEL-Sample-2 | | The 295 BEL statements for sample set used for the 2015 BioCreative challenge. | 11.4 K | Fabio Rinaldi | Nico Colic | 2023-11-28 | Released | |
| name_no | | | 3.33 K | | zhoukaiyin | 2023-11-28 | | |
| ykjeong_test | | pub_annotation_test | 276 | | | 2023-11-28 | Testing | |
| vtt_friends_s01e07 | | | 0 | | donghwan kim | 2023-11-24 | | |
| BioLarkPubmedHPO | | 228 abstracts manually annotated with Human Phenotype Ontology (HPO) concepts and harmonized by three curators, which can be used as a reference standard for free text annotation of human phenotypes. For more info, please see Groza et al. "Automatic concept recognition using the human phenotype ontology reference and test suite corpora", 2015. | 7.16 K | Tudor Groza | simon | 2023-11-29 | Released | |
| Training_Data_English_de_en | | | 0 | | wmtbio | 2023-11-27 | Developing | |
| PubMed_Structured_Abstracts | | Sections (zones) as retrieved from PubMed. | 131 K | | zebet | 2023-11-28 | Released | |
