Molecular_Biology

Documents (334) JSON TSV

source DB	source ID	text	size	updated at	# proj.	updated_at
PMC	6286601	Regmex: a statistical tool for exploring motifs in ranked sequence lists from genomics experiments Abstract Background Motif analysis methods have long been central for studying biological function o	40.7 KB	2020-12-02	3	-
PMC	1524773	On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences Abstract Given a set S of n locally aligned sequences, it is a needed prerequisite to partitio	60.5 KB	2020-12-30	4	-
PMC	1481596	Decomposition of overlapping protein complexes: A graph theoretical method for analyzing static and dynamic protein associations Abstract Background Most cellular processes are carried out by multi-p	37.7 KB	2020-12-30	4	-
PMC	1481597	Multiple sequence alignment with user-defined anchor points Abstract Background Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situatio	43.4 KB	2020-12-30	4	-
PMC	1459172	Partition function and base pairing probabilities of RNA heterodimers Abstract Background RNA has been recognized as a key player in cellular regulation in recent years. In many cases, non-coding RNA	32 KB	2020-12-30	4	-
PMC	1471791	Finding the region of pseudo-periodic tandem repeats in biological sequences Abstract Summary The genomes of many species are dominated by short sequences repeated consecutively. It is estimated that	22 KB	2020-12-30	4	-
PMC	1526732	P-value based visualization of codon usage data Abstract Two important and not yet solved problems in bacterial genome research are the identification of horizontally transferred genes and the predic	16.8 KB	2020-12-30	4	-
PMC	1570349	Inverse bifurcation analysis: application to simple gene systems Abstract Background Bifurcation analysis has proven to be a powerful method for understanding the qualitative behavior of gene regulat	28.5 KB	2020-12-30	4	-
PMC	1635054	Reconstructing protein structure from solvent exposure using tabu search Abstract Background A new, promising solvent exposure measure, called half-sphere-exposure (HSE), has recently been proposed.	29.7 KB	2020-12-30	4	-
PMC	1635699	An enhanced RNA alignment benchmark for sequence alignment programs Abstract Background The performance of alignment programs is traditionally tested on sets of protein sequences, of which a referenc	30 KB	2020-12-30	4	-