Molecular_Biology  

Documents (334) JSON TSV

source DB source ID text size updated at # proj. # Ann. updated_at
PMC 3161351 Sparsification of RNA structure prediction including pseudoknots Abstract Background Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still 31.6 KB 2021-02-10 3
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PMC 4340843 Protein docking with predicted constraints Abstract This paper presents a constraint-based method for improving protein docking results. Efficient constraint propagation cuts over 95% of the search t 32 KB 2021-02-10 3
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PMC 1459172 Partition function and base pairing probabilities of RNA heterodimers Abstract Background RNA has been recognized as a key player in cellular regulation in recent years. In many cases, non-coding RNA 32 KB 2020-12-30 4
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PMC 1570349 Inverse bifurcation analysis: application to simple gene systems Abstract Background Bifurcation analysis has proven to be a powerful method for understanding the qualitative behavior of gene regulat 28.5 KB 2020-12-30 4
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PMC 2930641 Survival associated pathway identification with group Lp penalized global AUC maximization Abstract It has been demonstrated that genes in a cell do not act independently. They interact with one anot 40.9 KB 2020-12-30 4
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PMC 2958853 Scoring function to predict solubility mutagenesis Abstract Background Mutagenesis is commonly used to engineer proteins with desirable properties not present in the wild type (WT) protein, such as i 41.9 KB 2020-12-30 4
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PMC 4391664 On the family-free DCJ distance and similarity Abstract Structural variation in genomes can be revealed by many (dis)similarity measures. Rearrangement operations, such as the so called double-cut-an 34.6 KB 2021-02-10 3
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PMC 4950428 A representation of a compressed de Bruijn graph for pan-genome analysis that enables search Abstract Background Recently, Marcus et al. (Bioinformatics 30:3476–83, 2014) proposed to use a compressed 58.7 KB 2021-02-10 3
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PMC 4765045 The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies Abstract Background The accurate annotation of genes in newly sequenced genomes remains a challenge. Alth 53 KB 2021-02-10 3
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PMC 4888255 Identification of donor splice sites using support vector machine: a computational approach based on positional, compositional and dependency features Abstract Background Identification of splice sit 37.9 KB 2021-02-10 3
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