PMC:7335631 / 4533-4936
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T55 | 49-56 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T56 | 85-92 | Body_part | denotes | genomes | http://purl.org/sig/ont/fma/fma84116 |
| T57 | 116-126 | Body_part | denotes | amino acid | http://purl.org/sig/ont/fma/fma82739 |
| T58 | 149-156 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T30 | 75-79 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T31 | 160-164 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 25-30 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T51 | 49-56 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T52 | 116-126 | Chemical | denotes | amino acid | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T53 | 116-121 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T54 | 122-126 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T55 | 149-156 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T35 | 0-10 | Sentence | denotes | 2 Methods |
| T36 | 11-106 | Sentence | denotes | From the NCBI virus database, all the protein sequences of 3617 SARS-CoV2 genomes were fetched. |
| T37 | 107-236 | Sentence | denotes | Then the amino acid sequences of envelope protein of SARS-CoV2 are exported in fasta format using file operations through Matlab. |
| T38 | 237-403 | Sentence | denotes | These sequences (fasta formatted) are blasted using Clustal-Omega and found the mismatched and from their mutations and their associated positions were detected [13]. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32640274-30976793-44882428 | 399-401 | 30976793 | denotes | 13 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T112 | 25-30 | NCBITaxon:10239 | denotes | virus |
| T113 | 75-84 | SP_7 | denotes | SARS-CoV2 |
| T114 | 85-92 | SO:0001026 | denotes | genomes |
| T115 | 140-148 | GO:0031975 | denotes | envelope |
| T116 | 160-169 | SP_7 | denotes | SARS-CoV2 |
| T30 | 140-148 | GO:0031975 | denotes | envelope |
| T31 | 160-169 | SP_7 | denotes | SARS-CoV2 |
| T41379 | 78-86 | GO:0031975 | denotes | S-CoV2 g |
| T85801 | 175-183 | GO:0031975 | denotes | xported |
| T15896 | 199-204 | NCBITaxon:10239 | denotes | using |
| T29585 | 237-240 | CHEBI:24870;CHEBI:24870 | denotes | The |
| T42657 | 265-273 | GO:0031975 | denotes | tted) ar |