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PMC:7272971 / 9821-10488 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
329 107-111 Gene denotes ACE2 Gene:59272
330 256-263 Gene denotes TMPRSS2 Gene:7113
331 272-277 Gene denotes spike Gene:43740568
332 301-305 Gene denotes ACE2 Gene:59272
333 335-340 Gene denotes CD209 Gene:30835
334 0-13 Species denotes Coronaviruses Tax:11118
335 33-38 Species denotes human Tax:9606
336 100-105 Species denotes CoV‐2 Tax:2697049
337 430-438 Species denotes MERS‐CoV Tax:1335626
338 39-58 Disease denotes CoV disease Ocular MESH:C000657245
339 150-159 Disease denotes infection MESH:D007239
340 205-223 Disease denotes corneal epithelium MESH:D003316
341 374-391 Disease denotes corneal dendritic MESH:D003316
342 483-492 Disease denotes infection MESH:D007239
343 600-621 Disease denotes palpebral conjunctiva MESH:C563620

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T70 68-72 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T71 81-85 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T72 118-122 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T73 177-187 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T74 192-203 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T75 205-223 Body_part denotes corneal epithelium http://purl.org/sig/ont/fma/fma58263
T76 213-223 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T77 239-248 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T78 278-285 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T79 320-330 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T80 342-346 Body_part denotes Cell http://purl.org/sig/ont/fma/fma68646
T81 350-354 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T82 382-397 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T83 392-397 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T84 414-425 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T85 451-455 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T86 521-532 Body_part denotes endothelium http://purl.org/sig/ont/fma/fma63916
T87 541-545 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T88 546-555 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T89 600-621 Body_part denotes palpebral conjunctiva http://purl.org/sig/ont/fma/fma59025
T90 644-663 Body_part denotes alveolar epithelium http://purl.org/sig/ont/fma/fma63915
T91 653-663 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T12 81-85 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T13 177-187 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T14 205-223 Body_part denotes corneal epithelium http://purl.obolibrary.org/obo/UBERON_0001772
T15 213-223 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T16 239-248 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T17 320-330 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T18 521-532 Body_part denotes endothelium http://purl.obolibrary.org/obo/UBERON_0001986
T19 541-545 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T20 546-555 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T21 600-621 Body_part denotes palpebral conjunctiva http://purl.obolibrary.org/obo/UBERON_0001812
T22 610-621 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T23 653-663 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T60 86-90 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T61 95-99 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T62 150-159 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T63 483-492 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T102 33-38 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T103 68-78 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T104 81-85 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T105 81-85 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T106 118-122 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T107 177-187 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T108 192-203 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T109 213-223 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T110 232-238 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T111 313-319 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T112 320-330 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T113 332-334 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T114 342-346 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell
T115 350-354 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T116 382-397 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T117 399-401 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T118 427-429 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T119 451-455 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T120 521-532 http://purl.obolibrary.org/obo/UBERON_0001986 denotes endothelium
T121 541-545 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T122 541-545 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T123 610-621 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T124 610-621 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T125 653-663 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T42 278-285 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T43 582-584 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T68 0-85 Sentence denotes Coronaviruses Receptor Role in human CoV disease Ocular surface (cell types) Lung
T69 86-94 Sentence denotes SARS‐CoV
T70 95-255 Sentence denotes SARS‐CoV‐2 ACE2 Host cell receptor and essential for infection + (conjunctival epithelium and fibroblasts; corneal epithelium) 31 + (airway epithelia)32, 33
T71 256-334 Sentence denotes TMPRSS2 Primes spike protein for binding to ACE2 – + (airway epithelium) 34
T72 335-429 Sentence denotes CD209 Cell‐to‐cell viral transfer + (corneal dendritic cells) 35 + (alveola macrophages) 36
T73 430-574 Sentence denotes MERS‐CoV CD26 Host cell receptor and essential for infection +/− (conjunctival vascular endothelium) 37 + (lung epithelia and endothelia) 38
T74 575-667 Sentence denotes CD66e Co‐receptor +/− (palpebral conjunctiva) 39 + (bronchial and alveolar epithelium) 32