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PMC:7247521 / 40394-41457 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
696 238-246 Species denotes patients Tax:9606
697 809-817 Species denotes patients Tax:9606
698 830-847 Species denotes novel coronavirus Tax:2697049
699 6-39 Disease denotes coronavirus (2019-nCov) infection MESH:C000657245
700 98-107 Disease denotes infection MESH:D007239
701 120-155 Disease denotes acute respiratory distress syndrome MESH:D012128
702 157-161 Disease denotes ARDS MESH:D012128
703 167-177 Disease denotes septicemia MESH:D018805
704 202-207 Disease denotes death MESH:D003643
705 257-291 Disease denotes multi-organ damage and dysfunction MESH:D009102
706 371-379 Disease denotes COVID-19 MESH:C000657245
707 619-627 Disease denotes COVID-19 MESH:C000657245
708 686-691 Disease denotes fever MESH:D005334
709 799-808 Disease denotes pneumonia MESH:D011014
710 818-826 Disease denotes infected MESH:D007239
711 925-933 Disease denotes COVID-19 MESH:C000657245

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T597 6-17 NCBITaxon:11118 denotes coronavirus
T598 19-28 SP_7 denotes 2019-nCov
T599 60-64 UBERON:0002048 denotes lung
T600 69-82 UBERON:0002405 denotes immune system
T601 126-137 UBERON:0001004 denotes respiratory
T602 202-207 GO:0016265 denotes death
T603 263-268 UBERON:0000062 denotes organ
T604 329-334 CHEBI:23888;CHEBI:23888 denotes drugs
T605 371-379 SP_7 denotes COVID-19
T606 430-434 CHEBI:23888;CHEBI:23888 denotes drug
T607 619-627 SP_7 denotes COVID-19
T608 836-847 NCBITaxon:11118 denotes coronavirus
T609 925-933 SP_7 denotes COVID-19
T610 945-957 CHEBI:52217;CHEBI:52217 denotes pharmacology

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T156 60-64 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T157 69-82 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T158 263-268 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T45 60-64 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T46 69-82 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T47 263-268 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T79 18-39 Disease denotes (2019-nCov) infection http://purl.obolibrary.org/obo/MONDO_0100096
T80 30-39 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T81 98-107 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T82 120-155 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T83 126-155 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T84 157-161 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T85 371-379 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T86 619-627 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T87 799-808 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T88 925-933 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T336 60-64 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T337 60-64 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T338 69-82 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T339 226-227 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T340 263-268 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T341 412-413 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T342 447-448 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T343 560-563 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T344 564-565 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T345 972-973 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T346 1040-1041 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T334 329-334 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T335 430-434 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T336 546-554 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T337 556-559 Chemical denotes TCM http://purl.obolibrary.org/obo/CHEBI_145500

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T22 91-107 Phenotype denotes Severe infection http://purl.obolibrary.org/obo/HP_0032169
T23 126-146 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T24 686-691 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T25 799-808 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T310 0-90 Sentence denotes Novel coronavirus (2019-nCov) infection is characterized by lung and immune system damage.
T311 91-212 Sentence denotes Severe infection can lead to acute respiratory distress syndrome (ARDS) and septicemia, and eventually lead to death [2].
T312 213-297 Sentence denotes In addition, a number of patients presented multi-organ damage and dysfunction [28].
T313 298-380 Sentence denotes However, there are no specific drugs or vaccine for the treatment of the COVID-19.
T314 381-503 Sentence denotes This reason may partly be that a single targeted drug cannot cure a complex disease with complex biological networks [29].
T315 504-725 Sentence denotes Despite the lack of strong evidence-based medicine, TCM has a good potential to complement the medical service for COVID-19, including reverting radiological changes, and shortening fever duration and hospital stay. [30].
T316 726-871 Sentence denotes It is observed that the total effective rate of QFPD in the treatment of pneumonia patients infected by novel coronavirus is more than 90 % [31].
T317 872-1063 Sentence denotes Therefore, we explored the mechanism of QFPD against COVID-19 by systems pharmacology, and provided a combination strategy to explore the functional units in QFPD from a holistic perspective.

2_test

Id Subject Object Predicate Lexical cue
32554251-32007143-6393505 209-210 32007143 denotes 2
32554251-31978945-6393506 293-295 31978945 denotes 28