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PMC:7080035 / 7219-8117 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T51 50-54 Body_part denotes back http://purl.org/sig/ont/fma/fma25056
T52 153-158 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T53 213-217 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T54 265-269 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T55 434-444 Body_part denotes right lung http://purl.org/sig/ont/fma/fma7309
T56 489-500 Body_part denotes lymph nodes http://purl.org/sig/ont/fma/fma5034
T57 489-494 Body_part denotes lymph http://purl.org/sig/ont/fma/fma9671
T58 529-540 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826
T59 805-815 Body_part denotes right lung http://purl.org/sig/ont/fma/fma7309
T60 855-866 Body_part denotes mediastinum http://purl.org/sig/ont/fma/fma9826

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T39 153-158 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T40 213-217 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T41 218-222 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T42 265-269 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T43 270-274 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T44 434-444 Body_part denotes right lung http://purl.obolibrary.org/obo/UBERON_0002167
T45 440-444 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T46 489-494 Body_part denotes lymph http://purl.obolibrary.org/obo/UBERON_0002391
T47 529-540 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728
T48 805-815 Body_part denotes right lung http://purl.obolibrary.org/obo/UBERON_0002167
T49 811-815 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T50 855-866 Body_part denotes mediastinum http://purl.obolibrary.org/obo/UBERON_0003728

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 122-132 Disease denotes leucopenia http://purl.obolibrary.org/obo/MONDO_0003785
T32 633-641 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T79 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T80 79-80 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 98-105 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T82 115-116 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T83 153-158 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T84 213-217 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T85 213-217 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T86 227-230 http://purl.obolibrary.org/obo/CLO_0001618 denotes a 9
T87 227-230 http://purl.obolibrary.org/obo/CLO_0001619 denotes a 9
T88 227-230 http://purl.obolibrary.org/obo/CLO_0001620 denotes a 9
T89 265-269 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T90 265-269 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T91 299-300 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 326-327 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T93 434-444 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lung
T94 455-456 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T95 489-500 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes
T96 657-664 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T97 669-671 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T98 805-815 http://purl.obolibrary.org/obo/UBERON_0002167 denotes right lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T32 353-356 Chemical denotes PET http://purl.obolibrary.org/obo/CHEBI_131701
T33 644-656 Chemical denotes nucleic acid http://purl.obolibrary.org/obo/CHEBI_33696
T34 652-656 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T35 691-700 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T36 705-728 Chemical denotes anti-inflammatory drugs http://purl.obolibrary.org/obo/CHEBI_35472
T37 723-728 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T32 50-59 Phenotype denotes back pain http://purl.obolibrary.org/obo/HP_0003418
T33 64-73 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T64 0-86 Sentence denotes A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week.
T65 87-152 Sentence denotes Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L).
T66 153-325 Sentence denotes Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy.
T67 326-466 Sentence denotes A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows).
T68 467-613 Sentence denotes Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows).
T69 614-665 Sentence denotes We did not perform SARS-CoV-2 nucleic acid testing.
T70 666-756 Sentence denotes An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.
T71 757-898 Sentence denotes Fig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
181 14-19 Species denotes woman Tax:9606
182 633-643 Species denotes SARS-CoV-2 Tax:2697049
183 345-352 Chemical denotes 18F-FDG MESH:D019788
184 50-59 Disease denotes back pain MESH:D001416
185 64-73 Disease denotes dry cough MESH:D003371
186 122-132 Disease denotes leucopenia MESH:C536227
187 314-324 Disease denotes malignancy MESH:D009369