PMC:7080035 / 7219-8117
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T51 | 50-54 | Body_part | denotes | back | http://purl.org/sig/ont/fma/fma25056 |
T52 | 153-158 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
T53 | 213-217 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T54 | 265-269 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T55 | 434-444 | Body_part | denotes | right lung | http://purl.org/sig/ont/fma/fma7309 |
T56 | 489-500 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
T57 | 489-494 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
T58 | 529-540 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
T59 | 805-815 | Body_part | denotes | right lung | http://purl.org/sig/ont/fma/fma7309 |
T60 | 855-866 | Body_part | denotes | mediastinum | http://purl.org/sig/ont/fma/fma9826 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T39 | 153-158 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T40 | 213-217 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T41 | 218-222 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
T42 | 265-269 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T43 | 270-274 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
T44 | 434-444 | Body_part | denotes | right lung | http://purl.obolibrary.org/obo/UBERON_0002167 |
T45 | 440-444 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T46 | 489-494 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
T47 | 529-540 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
T48 | 805-815 | Body_part | denotes | right lung | http://purl.obolibrary.org/obo/UBERON_0002167 |
T49 | 811-815 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T50 | 855-866 | Body_part | denotes | mediastinum | http://purl.obolibrary.org/obo/UBERON_0003728 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T31 | 122-132 | Disease | denotes | leucopenia | http://purl.obolibrary.org/obo/MONDO_0003785 |
T32 | 633-641 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T79 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T80 | 79-80 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T81 | 98-105 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T82 | 115-116 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T83 | 153-158 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
T84 | 213-217 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T85 | 213-217 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T86 | 227-230 | http://purl.obolibrary.org/obo/CLO_0001618 | denotes | a 9 |
T87 | 227-230 | http://purl.obolibrary.org/obo/CLO_0001619 | denotes | a 9 |
T88 | 227-230 | http://purl.obolibrary.org/obo/CLO_0001620 | denotes | a 9 |
T89 | 265-269 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T90 | 265-269 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T91 | 299-300 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T92 | 326-327 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T93 | 434-444 | http://purl.obolibrary.org/obo/UBERON_0002167 | denotes | right lung |
T94 | 455-456 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T95 | 489-500 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
T96 | 657-664 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T97 | 669-671 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
T98 | 805-815 | http://purl.obolibrary.org/obo/UBERON_0002167 | denotes | right lung |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T32 | 353-356 | Chemical | denotes | PET | http://purl.obolibrary.org/obo/CHEBI_131701 |
T33 | 644-656 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
T34 | 652-656 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T35 | 691-700 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
T36 | 705-728 | Chemical | denotes | anti-inflammatory drugs | http://purl.obolibrary.org/obo/CHEBI_35472 |
T37 | 723-728 | Chemical | denotes | drugs | http://purl.obolibrary.org/obo/CHEBI_23888 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T32 | 50-59 | Phenotype | denotes | back pain | http://purl.obolibrary.org/obo/HP_0003418 |
T33 | 64-73 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T64 | 0-86 | Sentence | denotes | A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. |
T65 | 87-152 | Sentence | denotes | Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). |
T66 | 153-325 | Sentence | denotes | Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. |
T67 | 326-466 | Sentence | denotes | A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). |
T68 | 467-613 | Sentence | denotes | Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). |
T69 | 614-665 | Sentence | denotes | We did not perform SARS-CoV-2 nucleic acid testing. |
T70 | 666-756 | Sentence | denotes | An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement. |
T71 | 757-898 | Sentence | denotes | Fig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
181 | 14-19 | Species | denotes | woman | Tax:9606 |
182 | 633-643 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
183 | 345-352 | Chemical | denotes | 18F-FDG | MESH:D019788 |
184 | 50-59 | Disease | denotes | back pain | MESH:D001416 |
185 | 64-73 | Disease | denotes | dry cough | MESH:D003371 |
186 | 122-132 | Disease | denotes | leucopenia | MESH:C536227 |
187 | 314-324 | Disease | denotes | malignancy | MESH:D009369 |