PMC:7080035 / 7219-8117 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T51","span":{"begin":50,"end":54},"obj":"Body_part"},{"id":"T52","span":{"begin":153,"end":158},"obj":"Body_part"},{"id":"T53","span":{"begin":213,"end":217},"obj":"Body_part"},{"id":"T54","span":{"begin":265,"end":269},"obj":"Body_part"},{"id":"T55","span":{"begin":434,"end":444},"obj":"Body_part"},{"id":"T56","span":{"begin":489,"end":500},"obj":"Body_part"},{"id":"T57","span":{"begin":489,"end":494},"obj":"Body_part"},{"id":"T58","span":{"begin":529,"end":540},"obj":"Body_part"},{"id":"T59","span":{"begin":805,"end":815},"obj":"Body_part"},{"id":"T60","span":{"begin":855,"end":866},"obj":"Body_part"}],"attributes":[{"id":"A51","pred":"fma_id","subj":"T51","obj":"http://purl.org/sig/ont/fma/fma25056"},{"id":"A52","pred":"fma_id","subj":"T52","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A53","pred":"fma_id","subj":"T53","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A55","pred":"fma_id","subj":"T55","obj":"http://purl.org/sig/ont/fma/fma7309"},{"id":"A56","pred":"fma_id","subj":"T56","obj":"http://purl.org/sig/ont/fma/fma5034"},{"id":"A57","pred":"fma_id","subj":"T57","obj":"http://purl.org/sig/ont/fma/fma9671"},{"id":"A58","pred":"fma_id","subj":"T58","obj":"http://purl.org/sig/ont/fma/fma9826"},{"id":"A59","pred":"fma_id","subj":"T59","obj":"http://purl.org/sig/ont/fma/fma7309"},{"id":"A60","pred":"fma_id","subj":"T60","obj":"http://purl.org/sig/ont/fma/fma9826"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T39","span":{"begin":153,"end":158},"obj":"Body_part"},{"id":"T40","span":{"begin":213,"end":217},"obj":"Body_part"},{"id":"T41","span":{"begin":218,"end":222},"obj":"Body_part"},{"id":"T42","span":{"begin":265,"end":269},"obj":"Body_part"},{"id":"T43","span":{"begin":270,"end":274},"obj":"Body_part"},{"id":"T44","span":{"begin":434,"end":444},"obj":"Body_part"},{"id":"T45","span":{"begin":440,"end":444},"obj":"Body_part"},{"id":"T46","span":{"begin":489,"end":494},"obj":"Body_part"},{"id":"T47","span":{"begin":529,"end":540},"obj":"Body_part"},{"id":"T48","span":{"begin":805,"end":815},"obj":"Body_part"},{"id":"T49","span":{"begin":811,"end":815},"obj":"Body_part"},{"id":"T50","span":{"begin":855,"end":866},"obj":"Body_part"}],"attributes":[{"id":"A39","pred":"uberon_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A40","pred":"uberon_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A41","pred":"uberon_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A42","pred":"uberon_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A43","pred":"uberon_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A44","pred":"uberon_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/UBERON_0002167"},{"id":"A45","pred":"uberon_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A46","pred":"uberon_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/UBERON_0002391"},{"id":"A47","pred":"uberon_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/UBERON_0003728"},{"id":"A48","pred":"uberon_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/UBERON_0002167"},{"id":"A49","pred":"uberon_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A50","pred":"uberon_id","subj":"T50","obj":"http://purl.obolibrary.org/obo/UBERON_0003728"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T31","span":{"begin":122,"end":132},"obj":"Disease"},{"id":"T32","span":{"begin":633,"end":641},"obj":"Disease"}],"attributes":[{"id":"A31","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0003785"},{"id":"A32","pred":"mondo_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T79","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T80","span":{"begin":79,"end":80},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T81","span":{"begin":98,"end":105},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T82","span":{"begin":115,"end":116},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T83","span":{"begin":153,"end":158},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T84","span":{"begin":213,"end":217},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T85","span":{"begin":213,"end":217},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T86","span":{"begin":227,"end":230},"obj":"http://purl.obolibrary.org/obo/CLO_0001618"},{"id":"T87","span":{"begin":227,"end":230},"obj":"http://purl.obolibrary.org/obo/CLO_0001619"},{"id":"T88","span":{"begin":227,"end":230},"obj":"http://purl.obolibrary.org/obo/CLO_0001620"},{"id":"T89","span":{"begin":265,"end":269},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T90","span":{"begin":265,"end":269},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T91","span":{"begin":299,"end":300},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T92","span":{"begin":326,"end":327},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T93","span":{"begin":434,"end":444},"obj":"http://purl.obolibrary.org/obo/UBERON_0002167"},{"id":"T94","span":{"begin":455,"end":456},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T95","span":{"begin":489,"end":500},"obj":"http://purl.obolibrary.org/obo/UBERON_0000029"},{"id":"T96","span":{"begin":657,"end":664},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T97","span":{"begin":669,"end":671},"obj":"http://purl.obolibrary.org/obo/CLO_0050510"},{"id":"T98","span":{"begin":805,"end":815},"obj":"http://purl.obolibrary.org/obo/UBERON_0002167"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T32","span":{"begin":353,"end":356},"obj":"Chemical"},{"id":"T33","span":{"begin":644,"end":656},"obj":"Chemical"},{"id":"T34","span":{"begin":652,"end":656},"obj":"Chemical"},{"id":"T35","span":{"begin":691,"end":700},"obj":"Chemical"},{"id":"T36","span":{"begin":705,"end":728},"obj":"Chemical"},{"id":"T37","span":{"begin":723,"end":728},"obj":"Chemical"}],"attributes":[{"id":"A32","pred":"chebi_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/CHEBI_131701"},{"id":"A33","pred":"chebi_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/CHEBI_33696"},{"id":"A34","pred":"chebi_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A35","pred":"chebi_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/CHEBI_22587"},{"id":"A36","pred":"chebi_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/CHEBI_35472"},{"id":"A37","pred":"chebi_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T32","span":{"begin":50,"end":59},"obj":"Phenotype"},{"id":"T33","span":{"begin":64,"end":73},"obj":"Phenotype"}],"attributes":[{"id":"A32","pred":"hp_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/HP_0003418"},{"id":"A33","pred":"hp_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/HP_0031246"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-sentences","denotations":[{"id":"T64","span":{"begin":0,"end":86},"obj":"Sentence"},{"id":"T65","span":{"begin":87,"end":152},"obj":"Sentence"},{"id":"T66","span":{"begin":153,"end":325},"obj":"Sentence"},{"id":"T67","span":{"begin":326,"end":466},"obj":"Sentence"},{"id":"T68","span":{"begin":467,"end":613},"obj":"Sentence"},{"id":"T69","span":{"begin":614,"end":665},"obj":"Sentence"},{"id":"T70","span":{"begin":666,"end":756},"obj":"Sentence"},{"id":"T71","span":{"begin":757,"end":898},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}

{"project":"LitCovid-PubTator","denotations":[{"id":"181","span":{"begin":14,"end":19},"obj":"Species"},{"id":"182","span":{"begin":633,"end":643},"obj":"Species"},{"id":"183","span":{"begin":345,"end":352},"obj":"Chemical"},{"id":"184","span":{"begin":50,"end":59},"obj":"Disease"},{"id":"185","span":{"begin":64,"end":73},"obj":"Disease"},{"id":"186","span":{"begin":122,"end":132},"obj":"Disease"},{"id":"187","span":{"begin":314,"end":324},"obj":"Disease"}],"attributes":[{"id":"A181","pred":"tao:has_database_id","subj":"181","obj":"Tax:9606"},{"id":"A182","pred":"tao:has_database_id","subj":"182","obj":"Tax:2697049"},{"id":"A183","pred":"tao:has_database_id","subj":"183","obj":"MESH:D019788"},{"id":"A184","pred":"tao:has_database_id","subj":"184","obj":"MESH:D001416"},{"id":"A185","pred":"tao:has_database_id","subj":"185","obj":"MESH:D003371"},{"id":"A186","pred":"tao:has_database_id","subj":"186","obj":"MESH:C536227"},{"id":"A187","pred":"tao:has_database_id","subj":"187","obj":"MESH:D009369"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A 61-year-old woman living in Wuhan complained of back pain and dry cough over a week. Laboratory testing revealed a mild leucopenia (WBC 3.47 × 109/L). Chest CT identified an 8-mm light shadow in the right upper lung lobe and a 9-mm solid nodule in the left lower lung lobe, which initially led to a suspicion of malignancy. A week thereafter, 18F-FDG PET/CT revealed multiple peripheral FDG-avid GGOs (SUVmax range 3.7–12.2) in the right lung (Fig. 3a, b, arrows). Multiple FDG-positive lymph nodes were also identified in the mediastinum and the right subclavian region (SUVmax range 3.4–5.4; Fig. 3c, arrows). We did not perform SARS-CoV-2 nucleic acid testing. An 18-day treatment with antiviral and anti-inflammatory drugs led to symptom improvement.\nFig. 3 Multiple peripheral FDG-avid GGOs in the right lung and multiple FDG-positive nodes in the mediastinum and the right subclavian region"}