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Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

101-120 / 556 show all
CORD-19-PD-UBERON PubDictionaries annotation for UBERON terms - updated at 2020-04-30 It is disease term annotation based on Uberon. The terms in Uberon are uploaded in PubDictionaries (Uberon), with which the annotations in this project are produced. The parameter configuration used for this project is here. Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved.1.42 MJin-Dong Kim2023-11-24Released
CORD-19-sample-CHEBI 16Jin-Dong Kim2023-11-29Developing
CORD-19-sample-FMA-UBERON 61Jin-Dong Kim2023-11-29Developing
CORD-19-sample-HP 39Jin-Dong Kim2023-11-27Developing
CORD-19-sample-IDO 76Jin-Dong Kim2023-11-29Developing
CORD-19-sample-MONDO 113Jin-Dong Kim2023-11-29Developing
CORD-19-sample-paragraphs 28Jin-Dong Kim2023-11-29Developing
CORD-19-sample-sentences 161Jin-Dong Kim2023-11-27Developing
CORD-19-sample-UBERON 54Jin-Dong Kim2023-11-26Developing
CORD-19-SciBite-sentences 11.2 KJin-Dong Kim2023-11-26Testing
CORD-19-Sentences 13.4 MJin-Dong Kim2023-11-24Testing
CORD-PICO Automatic annotation of the CORD-19 dataset with PICO categories. The corpus was automatically labeled with an LSTM-CRF model trained on human-annotated PubMed abstracts from https://github.com/bepnye/EBM-NLP. Currently, titles and abstracts only are annotated using Population, Intervention and Outcome labels, as well as more fine-grained labels such as Age, Drug, Mortality and others.69.6 KSimon Susterssuster2023-11-27Developing
Covid19_manual_annotation 5.1 KAikoHIRAKI2023-11-29Developing
Covid19_manual_annotation_v2 4.58 KAikoHIRAKI2023-11-24Developing
craft-ca-core-dev Development data for CRAFT CA shared task, core concepts only. This project contains the development (training) annotations for the Concept Annotation task of the CRAFT Shared Task 2019. This particular set of concept annotations is the "core" set. See the task description for details, but this set contains only annotations to concepts that appear in the original 10 Open Biomedical Ontologies used for annotation. (That is to say, it does not contain any annotations to extension classes).59.8 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-ca-core-ex-dev Development data for CRAFT CA shared task, core concepts + EXTENSIONS. This project contains the development (training) annotations for the Concept Annotation task of the CRAFT Shared Task 2019. This particular set of concept annotations is the "core+extensions" set. See the task description for details, but this set contains annotations to concepts that appear in the original 10 Open Biomedical Ontologies used for annotation PLUS annotations to extension classes created using the core concepts.90.2 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-sa-dev Development data for CRAFT SA shared task. This project contains the development (training) annotations for the Structural Annotation task of the CRAFT Shared Task 2019. This particular set contains token and sentence annotations with tokens linked via dependency relations. These dependency relations were automatically generated using the manually curated CRAFT constituency treebank files as input.490 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-27Released
CyanoBase Cyanobacteria are prokaryotic organisms that have served as important model organisms for studying oxygenic photosynthesis and have played a significant role in the Earthfs history as primary producers of atmospheric oxygen. Publication: http://www.aclweb.org/anthology/W12-24301.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
dailymed_spl Annotation of indications from DailyMed structured product labels0micheldumontier2023-11-29Developing
demo4TogoSite 323AikoHIRAKI2023-11-26Developing
Name T# Ann.AuthorMaintainerUpdated_atStatus

101-120 / 556 show all
CORD-19-PD-UBERON 1.42 MJin-Dong Kim2023-11-24Released
CORD-19-sample-CHEBI 16Jin-Dong Kim2023-11-29Developing
CORD-19-sample-FMA-UBERON 61Jin-Dong Kim2023-11-29Developing
CORD-19-sample-HP 39Jin-Dong Kim2023-11-27Developing
CORD-19-sample-IDO 76Jin-Dong Kim2023-11-29Developing
CORD-19-sample-MONDO 113Jin-Dong Kim2023-11-29Developing
CORD-19-sample-paragraphs 28Jin-Dong Kim2023-11-29Developing
CORD-19-sample-sentences 161Jin-Dong Kim2023-11-27Developing
CORD-19-sample-UBERON 54Jin-Dong Kim2023-11-26Developing
CORD-19-SciBite-sentences 11.2 KJin-Dong Kim2023-11-26Testing
CORD-19-Sentences 13.4 MJin-Dong Kim2023-11-24Testing
CORD-PICO 69.6 KSimon Susterssuster2023-11-27Developing
Covid19_manual_annotation 5.1 KAikoHIRAKI2023-11-29Developing
Covid19_manual_annotation_v2 4.58 KAikoHIRAKI2023-11-24Developing
craft-ca-core-dev 59.8 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-ca-core-ex-dev 90.2 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-sa-dev 490 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-27Released
CyanoBase 1.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
dailymed_spl 0micheldumontier2023-11-29Developing
demo4TogoSite 323AikoHIRAKI2023-11-26Developing