> top > projects

Projects

NameTDescription# Ann.Author MaintainerUpdated_atStatus

41-60 / 238 show all
bionlp-st-ge-2016-uniprot UniProt protein annotation to the benchmark data set of BioNLP-ST 2016 GE task: reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test). The annotations are produced based on a dictionary which is semi-automatically compiled for the 34 full paper articles included in the benchmark data set (20 in the reference data set + 14 in the test data set). For detailed information about BioNLP-ST GE 2016 task data sets, please refer to the benchmark reference data set (bionlp-st-ge-2016-reference) and benchmark test data set (bionlp-st-ge-2016-test). 16.2 KDBCLSJin-Dong Kim2023-11-29Beta
pmc-enju-pas Predicate-argument structure annotation produced by Enju. This data set is initially produced as a supporting resource for BioNLP-ST 2016 GE task. As so, it currently includes the 34 full paper articles that are in the benchmark data sets of GE 2016 task, reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test), but will be extended to include more papers from the PubMed Central Open Access subset (PMCOA). 205 KDBCLSJin-Dong Kim2023-11-28Developing
sentences Sentence segmentation annotation. Automatic annotation by TextSentencer.6.96 MDBCLSJin-Dong Kim2023-11-24Developing
ICD10 Annotation for disease names as defined in ICD101.6 KDBCLSJin-Dong Kim2023-11-29Developing
UBERON-AE Annotation for anatomical entities based on the "Anatomical Entity" subtree of UBERON ontology. Annotations are automatically produced using PubDictionaries with threshold: 0.85.859 KDBCLSJin-Dong Kim2023-11-29Developing
Allie An annotation set of abbreviations and expanded forms extracted from PubMed/MEDLINE by machines.8.7 MDatabase Center for Life ScienceYasunori Yamamoto2023-11-24Developing
FSU-PRGE A new broad-coverage corpus composed of 3,306 MEDLINE abstracts dealing with gene and protein mentions. The annotation process was semi-automatic. Publication: http://aclweb.org/anthology/W/W10/W10-1838.pdf59.5 KCALBC ProjectYue Wang2023-11-26Released
BioASQ-sample collection of PubMed articles which appear in the BioASQ sample data set.0BioASQJin-Dong Kim2023-11-28Testing
relna https://www.tagtog.net/jmcejuela/relna2.77 KAshish Baghudana and Juan Miguel Cejuelatagtog2023-11-29Developing
LitCovid-PD-HP 922 KJin-Dong Kim2023-11-28Beta
example-dialog 0Jin-Dong Kim2023-11-27Testing
uniprot-mouse Protein annotation based on UniProt11.5 KJin-Dong Kim2023-11-28Developing
JournalClub 170AikoHIRAKI2023-11-29Developing
Test-merged 3.21 KJin-Dong Kim2023-11-29
ggdb-test 2.4 KJin-Dong Kim2023-11-29Testing
GlyCosmos6-HP 0Jin-Dong Kim2023-11-28
IMDB-NLP Annotations for chunking and semantic role labeling based on in-memory databases.02016-05-06Uploading
LitCoin-GeneOrGeneProduct-v2 threshold = 0.938.98 KJin-Dong Kim2023-11-29
PubCasesCollection abstracts in PubCases0Jin-Dong Kim2023-11-29
GlyCosmos600-GlycoGenes 87Jin-Dong Kim2023-11-28Testing
NameT# Ann.Author MaintainerUpdated_atStatus

41-60 / 238 show all
bionlp-st-ge-2016-uniprot 16.2 KDBCLSJin-Dong Kim2023-11-29Beta
pmc-enju-pas 205 KDBCLSJin-Dong Kim2023-11-28Developing
sentences 6.96 MDBCLSJin-Dong Kim2023-11-24Developing
ICD10 1.6 KDBCLSJin-Dong Kim2023-11-29Developing
UBERON-AE 859 KDBCLSJin-Dong Kim2023-11-29Developing
Allie 8.7 MDatabase Center for Life ScienceYasunori Yamamoto2023-11-24Developing
FSU-PRGE 59.5 KCALBC ProjectYue Wang2023-11-26Released
BioASQ-sample 0BioASQJin-Dong Kim2023-11-28Testing
relna 2.77 KAshish Baghudana and Juan Miguel Cejuelatagtog2023-11-29Developing
LitCovid-PD-HP 922 KJin-Dong Kim2023-11-28Beta
example-dialog 0Jin-Dong Kim2023-11-27Testing
uniprot-mouse 11.5 KJin-Dong Kim2023-11-28Developing
JournalClub 170AikoHIRAKI2023-11-29Developing
Test-merged 3.21 KJin-Dong Kim2023-11-29
ggdb-test 2.4 KJin-Dong Kim2023-11-29Testing
GlyCosmos6-HP 0Jin-Dong Kim2023-11-28
IMDB-NLP 02016-05-06Uploading
LitCoin-GeneOrGeneProduct-v2 8.98 KJin-Dong Kim2023-11-29
PubCasesCollection 0Jin-Dong Kim2023-11-29
GlyCosmos600-GlycoGenes 87Jin-Dong Kim2023-11-28Testing