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Projects

Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

421-440 / 557 show all
ENG_NER_NEL_mabarros 452mabarros2023-12-01Developing
ENG_NER_NEL_Diana 461dpavot2023-11-29Uploading
ENG_NER_NEL_CONSENSUS 607dpavot2023-11-28Developing
ENG_NER_NEL Annotations in COVID-19 related PubMed abstracts from the following ontologies: Disease Ontology ("do"), Gene Ontology ("go"), Human Phenotype Ontology ("hpo"), ChEBI ontology ("chebi"), MeSH 493LASIGE-DeSTpruas_182023-11-26Developing
EDAN70 NLP tagging of articles concerning covid19.0fettmedknaoz2023-11-29
EDAM-topics annotation for EDAM topics11.6 KJin-Dong Kim2023-11-29Testing
EDAM-DFO annotation for EDAM terms for data, formats, and operations12.5 KJin-Dong Kim2023-11-29Testing
EC-Neurodegenerative Alternative methods to animal experiments for neurodegenerative diseases.0zebet2023-11-30Developing
DocumentLevelAnnotationSample A sample project for document level annotation47Jin-Dong Kim2023-11-29Testing
DLUT931 DLUT NLP Lab.Test our event extration result for 16 GE task.4.57 KDLUT9312023-11-30Testing
DisGeNET5_variant_disease The file contains variant-disease associations obtained by text mining MEDLINE abstracts using the BeFree system, including the variant and disease off sets. 144 KIBI GroupYue Wang2023-11-24Released
DisGeNET5_gene_disease The file contains gene-disease associations obtained by text mining MEDLINE abstracts using the BeFree system including the gene and disease off sets.2.04 MIBI GroupYue Wang2023-11-24Released
DisGeNet-2017-sample 2.93 KJin-Dong Kim2023-11-29Testing
DisGeNET Disease-Gene association annotation.3.12 MNuria Queralt Jin-Dong Kim2023-11-24Beta
disease_ontology_term_microbe 5evangelos2023-11-29Developing
Disease_Markers 0Sophie Nam2023-11-29
disease_gene_microbe_small Small version (48 abstract that mention both Crohns and S. aureus) for development purposes Abbreviation: dgm Content: annotated abstracts on Crohn’s disease or on on Staphylococcus aureus (according to the jensenlab.org indexing resources) Entity types: (three for a start, organisms (NCBI Taxonomy taxa), disease (Disease Ontology terms), human genes (ENSEMBL proteins) Aim: Explore indirect associations of diseases to microbial species in this corpus via gene co-mentions536evangelos2023-11-27Testing
demo4TogoSite 323AikoHIRAKI2023-11-26Developing
dailymed_spl Annotation of indications from DailyMed structured product labels0micheldumontier2023-11-29Developing
CyanoBase Cyanobacteria are prokaryotic organisms that have served as important model organisms for studying oxygenic photosynthesis and have played a significant role in the Earthfs history as primary producers of atmospheric oxygen. Publication: http://www.aclweb.org/anthology/W12-24301.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
Name T# Ann.AuthorMaintainerUpdated_atStatus

421-440 / 557 show all
ENG_NER_NEL_mabarros 452mabarros2023-12-01Developing
ENG_NER_NEL_Diana 461dpavot2023-11-29Uploading
ENG_NER_NEL_CONSENSUS 607dpavot2023-11-28Developing
ENG_NER_NEL 493LASIGE-DeSTpruas_182023-11-26Developing
EDAN70 0fettmedknaoz2023-11-29
EDAM-topics 11.6 KJin-Dong Kim2023-11-29Testing
EDAM-DFO 12.5 KJin-Dong Kim2023-11-29Testing
EC-Neurodegenerative 0zebet2023-11-30Developing
DocumentLevelAnnotationSample 47Jin-Dong Kim2023-11-29Testing
DLUT931 4.57 KDLUT9312023-11-30Testing
DisGeNET5_variant_disease 144 KIBI GroupYue Wang2023-11-24Released
DisGeNET5_gene_disease 2.04 MIBI GroupYue Wang2023-11-24Released
DisGeNet-2017-sample 2.93 KJin-Dong Kim2023-11-29Testing
DisGeNET 3.12 MNuria Queralt Jin-Dong Kim2023-11-24Beta
disease_ontology_term_microbe 5evangelos2023-11-29Developing
Disease_Markers 0Sophie Nam2023-11-29
disease_gene_microbe_small 536evangelos2023-11-27Testing
demo4TogoSite 323AikoHIRAKI2023-11-26Developing
dailymed_spl 0micheldumontier2023-11-29Developing
CyanoBase 1.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released