> top > projects

Projects

Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

401-420 / 590 show all
GlycoBiology-GDGDB GDGDB-based annotation to GlycoBiology abstracts 2.46 KToshihide Shikanaishikanai2023-11-29Testing
GlycoBiology-FMA FMA ontology-based annotation to GlycoBiology abstracts96.3 KJin-Dong Kim2023-11-29Testing
GlycoBiology-Epitope GlycoEpitope-based annotation to GlycoBiology abstracts3.18 KShujiro Okudashuo502023-11-29Testing
GlycoBiology-cGGDB cGGDB-based annotation to GlycoBiology abstracts36Toshihide Shikanaishikanai2023-11-28Testing
Glycan-Motif 11.1 KISSAKU YAMADA2023-11-29Testing
Glycan-Abbreviation Glycan-Abbreviation - GlycoNAVI Project0ISSAKU YAMADA2023-11-29Testing
ggdb-test 2.4 KJin-Dong Kim2023-11-29Testing
GGDB-2020 2.44 Kangata2023-11-30Developing
Genomics_Informatics Genomics & Informatics (NLM title abbreviation: Genomics Inform) is the official journal of the Korea Genome Organization. Text corpus for this journal annotated with various levels of linguistic information would be a valuable resource as the process of information extraction requires syntactic, semantic, and higher levels of natural language processing. In this study, we publish our new corpus called GNI Corpus version 1.0, extracted and annotated from full texts of Genomics & Informatics, with NLTK (Natural Language ToolKit)-based text mining script. The preliminary version of the corpus could be used as a training and testing set of a system that serves a variety of functions for future biomedical text mining.35.3 KHyun-Seok Parkewha-bio2023-11-29Beta
Genomics_Inform 0Sophie Nam2023-11-29
Genomics_fulltext 0Sophie Nam2023-11-29
genia-medco-coref Coreference annotation made to the Genia corpus, following the MUC annotation scheme. It is a product of the collaboration between the Genia and the MedCo projects.45.9 KMedCo project & Genia projectJin-Dong Kim2023-11-24Developing
GENIAcorpus multi_cell (1,782) mono_cell (222) virus (2,136) protein_family_or_group (8,002) protein_complex (2,394) protein_molecule (21,290) protein_subunit (942) protein_substructure (129) protein_domain_or_region (1,044) protein_other (97) peptide (521) amino_acid_monomer (784) DNA_family_or_group (332) DNA_molecule (664) DNA_substructure (2) DNA_domain_or_region (39) DNA_other (16) RNA_family_or_group (1,545) RNA_molecule (554) RNA_substructure (106) RNA_domain_or_region (8,237) RNA_other (48) polynucleotide (259) nucleotide (243) lipid (2,375) carbohydrate (99) other_organic_compound (4,113) body_part (461) tissue (706) cell_type (7,473) cell_component (679) cell_line (4,129) other_artificial_source (211) inorganic (258) atom (342) other (21,056) 78.9 KGENIA ProjectYue Wang2023-11-29Released
geneset_names 0alo332022-04-26Released
Gene_Chemical EMU abstract annotation0zhoukaiyin2023-11-29Developing
funRiceGenes-exact 841Yue Wang2023-11-28Developing
funRiceGenes-all 1.51 KPubDictionariesYue Wang2023-11-29Developing
FSU-PRGE A new broad-coverage corpus composed of 3,306 MEDLINE abstracts dealing with gene and protein mentions. The annotation process was semi-automatic. Publication: http://aclweb.org/anthology/W/W10/W10-1838.pdf59.5 KCALBC ProjectYue Wang2023-11-26Released
Frame annotation ver1 0Younggyun Hahmkaist_nlp2023-11-29Testing
Fragaria_ananassa_genes 0hidekih152023-11-28
Name T# Ann.AuthorMaintainerUpdated_atStatus

401-420 / 590 show all
GlycoBiology-GDGDB 2.46 KToshihide Shikanaishikanai2023-11-29Testing
GlycoBiology-FMA 96.3 KJin-Dong Kim2023-11-29Testing
GlycoBiology-Epitope 3.18 KShujiro Okudashuo502023-11-29Testing
GlycoBiology-cGGDB 36Toshihide Shikanaishikanai2023-11-28Testing
Glycan-Motif 11.1 KISSAKU YAMADA2023-11-29Testing
Glycan-Abbreviation 0ISSAKU YAMADA2023-11-29Testing
ggdb-test 2.4 KJin-Dong Kim2023-11-29Testing
GGDB-2020 2.44 Kangata2023-11-30Developing
Genomics_Informatics 35.3 KHyun-Seok Parkewha-bio2023-11-29Beta
Genomics_Inform 0Sophie Nam2023-11-29
Genomics_fulltext 0Sophie Nam2023-11-29
genia-medco-coref 45.9 KMedCo project & Genia projectJin-Dong Kim2023-11-24Developing
GENIAcorpus 78.9 KGENIA ProjectYue Wang2023-11-29Released
geneset_names 0alo332022-04-26Released
Gene_Chemical 0zhoukaiyin2023-11-29Developing
funRiceGenes-exact 841Yue Wang2023-11-28Developing
funRiceGenes-all 1.51 KPubDictionariesYue Wang2023-11-29Developing
FSU-PRGE 59.5 KCALBC ProjectYue Wang2023-11-26Released
Frame annotation ver1 0Younggyun Hahmkaist_nlp2023-11-29Testing
Fragaria_ananassa_genes 0hidekih152023-11-28