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NameTDescription# Ann.AuthorMaintainerUpdated_atStatus

421-440 / 590 show all
ykjeong_test pub_annotation_test2762023-11-28Testing
GlyCosmos600-GlycoGenes 87Jin-Dong Kim2023-11-28Testing
LitCovid-docs Updated at 2021-01-12 A comprehensive literature resource on the subject of Covid-19 is collected by NCBI: https://www.ncbi.nlm.nih.gov/research/coronavirus/ The LitCovid project@PubAnnotation is a collection of the titles and abstracts of the LitCovid dataset, for the people who want to perform text mining analysis. Please note that if you produce some annotation to the documents in this project, and contribute the annotation back to PubAnnotation, it will become publicly available together with contribution from other people. If you want to contribute your annotation to PubAnnotation, please refer to the documentation page: http://www.pubannotation.org/docs/submit-annotation/ The list of the PMID is sourced from here The 6 entries of the following PMIDs could not be included because they were not available from PubMed:32161394, 32104909, 32090470, 32076224, 32161394 32188956, 32238946. Below is a notice from the original LitCovid dataset: PUBLIC DOMAIN NOTICE National Center for Biotechnology Information This software/database is a "United States Government Work" under the terms of the United States Copyright Act. It was written as part of the author's official duties as a United States Government employee and thus cannot be copyrighted. This software/database is freely available to the public for use. The National Library of Medicine and the U.S. Government have not placed any restriction on its use or reproduction. Although all reasonable efforts have been taken to ensure the accuracy and reliability of the software and data, the NLM and the U.S. Government do not and cannot warrant the performance or results that may be obtained by using this software or data. The NLM and the U.S. Government disclaim all warranties, express or implied, including warranties of performance, merchantability or fitness for any particular purpose. Please cite the authors in any work or product based on this material : Chen Q, Allot A, & Lu Z. (2020) Keep up with the latest coronavirus research, Nature 579:193 18Jin-Dong Kim2023-11-28Testing
BioASQ-sample collection of PubMed articles which appear in the BioASQ sample data set.0BioASQJin-Dong Kim2023-11-28Testing
blah6 device Annotator374slee72682023-11-28Testing
LitCoin_Mondo 1.96 KYasunori Yamamoto2023-11-28Testing
GlycoBiology-cGGDB cGGDB-based annotation to GlycoBiology abstracts36Toshihide Shikanaishikanai2023-11-28Testing
Testing Testing241Hyun-Seok Parkhsp202023-11-28Testing
Parkinson 54Jin-Dong Kim2023-11-28Testing
Colil Colil (Comments on Literature in Literature) is a search service for citation contexts utilized in the biomedical domain. Colil searches for a cited paper in the Colil database and then returns a list of the citation contexts for it and its relevant papers based on co-citations.3.34 KDBCLSToyofumi Fujiwara2023-11-28Testing
CHEMDNER-training-test The training subset of the CHEMDNER corpus29.4 KMartin Krallinger et al.Jin-Dong Kim2023-11-27Testing
GlycoBiology-PACDB cGGDB-based annotation to GlycoBiology abstracts3.03 KToshihide Shikanaishikanai2023-11-27Testing
pubtator-sample Sample annotation of PubTator produced by Zhiyong Lu et al.28Zhiyong LuJin-Dong Kim2023-11-27Testing
taxonomy 10rdmpage2023-11-27Testing
performance-test a project for performance test480 KJin-Dong Kim2023-11-27Testing
disease_gene_microbe_small Small version (48 abstract that mention both Crohns and S. aureus) for development purposes Abbreviation: dgm Content: annotated abstracts on Crohn’s disease or on on Staphylococcus aureus (according to the jensenlab.org indexing resources) Entity types: (three for a start, organisms (NCBI Taxonomy taxa), disease (Disease Ontology terms), human genes (ENSEMBL proteins) Aim: Explore indirect associations of diseases to microbial species in this corpus via gene co-mentions536evangelos2023-11-27Testing
Glycobiology-GlycanName 946Toshihide Shikanaishikanai2023-11-27Testing
example-dialog 0Jin-Dong Kim2023-11-27Testing
GlyCosmos600-GlycoEpitope 277Jin-Dong Kim2023-11-27Testing
AIMed The AIMed corpus is one of the most widely used corpora for protein-protein interaction extraction. The protein annotations are either parts of the protein interaction annotations, or are uninvolved in any protein interaction annotation. Publication: http://www.cs.utexas.edu/~ml/papers/bionlp-aimed-04.pdf4.04 KThe University of Texas at AustinYue Wang2023-11-27Testing
NameT# Ann.AuthorMaintainerUpdated_atStatus

421-440 / 590 show all
ykjeong_test 2762023-11-28Testing
GlyCosmos600-GlycoGenes 87Jin-Dong Kim2023-11-28Testing
LitCovid-docs 18Jin-Dong Kim2023-11-28Testing
BioASQ-sample 0BioASQJin-Dong Kim2023-11-28Testing
blah6 374slee72682023-11-28Testing
LitCoin_Mondo 1.96 KYasunori Yamamoto2023-11-28Testing
GlycoBiology-cGGDB 36Toshihide Shikanaishikanai2023-11-28Testing
Testing 241Hyun-Seok Parkhsp202023-11-28Testing
Parkinson 54Jin-Dong Kim2023-11-28Testing
Colil 3.34 KDBCLSToyofumi Fujiwara2023-11-28Testing
CHEMDNER-training-test 29.4 KMartin Krallinger et al.Jin-Dong Kim2023-11-27Testing
GlycoBiology-PACDB 3.03 KToshihide Shikanaishikanai2023-11-27Testing
pubtator-sample 28Zhiyong LuJin-Dong Kim2023-11-27Testing
taxonomy 10rdmpage2023-11-27Testing
performance-test 480 KJin-Dong Kim2023-11-27Testing
disease_gene_microbe_small 536evangelos2023-11-27Testing
Glycobiology-GlycanName 946Toshihide Shikanaishikanai2023-11-27Testing
example-dialog 0Jin-Dong Kim2023-11-27Testing
GlyCosmos600-GlycoEpitope 277Jin-Dong Kim2023-11-27Testing
AIMed 4.04 KThe University of Texas at AustinYue Wang2023-11-27Testing