LitCovid-docs-s | | | 0 | | Jin-Dong Kim | 2023-11-29 | Released | |
LitCovid-PD-MONDO-v1 | | PubDictionaries annotation for disease terms - updated at 2020-04-20
It is based on MONDO Version 2020-04-20.
The terms in MONDO are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 13.4 K | | Jin-Dong Kim | 2023-11-29 | Released | |
LitCovid-PD-HP-v1 | | PubDictionaries annotation for human phenotype terms - updated at 2020-04-20
Disease term annotation based on HP.
Version 2020-04-20.
The terms in HP are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 3.03 K | | Jin-Dong Kim | 2023-11-29 | Released | |
RDoCTask2SampleData | | Each annotation file contains an annotated abstract with the most relevant sentence. The relevant sentence is annotated with the RDoC category name. The annotation data are formatted as json files. Please refer to the following page for a more detailed description of the json format http://www.pubannotation.org/docs/annotation-format/.
| 10 | | mmanani1s | 2023-11-29 | Released | |
RDoCTask1SampleData | | Each annotation file contains an annotated abstract with an RDoC category. Each title span in these sample data is annotated with the corresponding related RDoC construct, although the RDoC category would apply for the entire abstract. The annotation data are formatted as json files. Please refer to the following page for a more detailed description of the json format http://www.pubannotation.org/docs/annotation-format/. | 20 | | mmanani1s | 2023-11-29 | Released | |
QFMC_MEDLINE | | Quaero French Medical Corpus:
Annotation of MEDLINE titles | 5.9 K | Aurélie Névéol | Pierre Zweigenbaum | 2023-11-29 | Beta | |
LitCoin-entities | | | 13.6 K | | Jin-Dong Kim | 2023-11-29 | Testing | |
PIR-corpus2 | | The protein tag was used to tag proteins, or protein-associated or -related objects, such as domains, pathways, expression of gene.
Annotation guideline: http://pir.georgetown.edu/pirwww/about/doc/manietal.pdf | 5.52 K | University of Delaware and Georgetown University Medical Center | Yue Wang | 2023-11-29 | Released | |
age_PMA_annotations | | | 99 | | laurenc | 2023-11-29 | Developing | |
acggdb_ggdb | | | 0 | | nfujita | 2023-11-29 | | |
Wangshuguang | | HZAU_bioinformatics_competition | 603 | wangshuguang | wangshuguang | 2023-11-29 | Released | |
Trait_curation150831 | | | 620 | Sachiko_Shirasawa | Sachiko Shirasawa | 2023-11-29 | Testing | |
Trait_curation150825 | | Trait curation | 0 | Sachiko_Shirasawa | Sachiko Shirasawa | 2023-11-29 | Testing | |
Training_Data_English_es_en | | | 0 | | wmtbio | 2023-11-29 | Developing | |
Test_PubTator | | | 62 | | Chih-Hsuan Wei | 2023-11-29 | Testing | |
Test-merged-2 | | | 3.51 K | | admin | 2023-11-29 | | |
Test-merged | | | 3.21 K | | Jin-Dong Kim | 2023-11-29 | | |
TEST-DiseaseOrPhenotypicFeature | | Annotated by Mesh_All_FN | 795 | | Eisuke Dohi | 2023-11-29 | Released | |
TEST-ChemicalEntity | | ChemicalEntity : Annotated by PD-MeSH2022_CHEBI_tuned-B | 827 | | yucca | 2023-11-29 | Beta | |
TEST-CellLine | | Annotation: AnnotationByCellosaurus | 76 | | Yasunori Yamamoto | 2023-11-29 | Testing | |