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Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

461-480 / 590 show all
DisGeNet-2017-sample 2.93 KJin-Dong Kim2023-11-29Testing
DisGeNET Disease-Gene association annotation.3.12 MNuria Queralt Jin-Dong Kim2023-11-24Beta
disease_ontology_term_microbe 5evangelos2023-11-29Developing
Disease_Markers 0Sophie Nam2023-11-29
disease_gene_microbe_small Small version (48 abstract that mention both Crohns and S. aureus) for development purposes Abbreviation: dgm Content: annotated abstracts on Crohn’s disease or on on Staphylococcus aureus (according to the jensenlab.org indexing resources) Entity types: (three for a start, organisms (NCBI Taxonomy taxa), disease (Disease Ontology terms), human genes (ENSEMBL proteins) Aim: Explore indirect associations of diseases to microbial species in this corpus via gene co-mentions536evangelos2023-11-27Testing
demo4TogoSite 323AikoHIRAKI2023-11-26Developing
dailymed_spl Annotation of indications from DailyMed structured product labels0micheldumontier2023-11-29Developing
CyanoBase Cyanobacteria are prokaryotic organisms that have served as important model organisms for studying oxygenic photosynthesis and have played a significant role in the Earthfs history as primary producers of atmospheric oxygen. Publication: http://www.aclweb.org/anthology/W12-24301.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
craft-sa-dev Development data for CRAFT SA shared task. This project contains the development (training) annotations for the Structural Annotation task of the CRAFT Shared Task 2019. This particular set contains token and sentence annotations with tokens linked via dependency relations. These dependency relations were automatically generated using the manually curated CRAFT constituency treebank files as input.490 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-27Released
craft-ca-core-ex-dev Development data for CRAFT CA shared task, core concepts + EXTENSIONS. This project contains the development (training) annotations for the Concept Annotation task of the CRAFT Shared Task 2019. This particular set of concept annotations is the "core+extensions" set. See the task description for details, but this set contains annotations to concepts that appear in the original 10 Open Biomedical Ontologies used for annotation PLUS annotations to extension classes created using the core concepts.90.2 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-ca-core-dev Development data for CRAFT CA shared task, core concepts only. This project contains the development (training) annotations for the Concept Annotation task of the CRAFT Shared Task 2019. This particular set of concept annotations is the "core" set. See the task description for details, but this set contains only annotations to concepts that appear in the original 10 Open Biomedical Ontologies used for annotation. (That is to say, it does not contain any annotations to extension classes).59.8 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
Covid19_manual_annotation_v2 4.58 KAikoHIRAKI2023-11-24Developing
Covid19_manual_annotation 5.1 KAikoHIRAKI2023-11-29Developing
CORD-PICO Automatic annotation of the CORD-19 dataset with PICO categories. The corpus was automatically labeled with an LSTM-CRF model trained on human-annotated PubMed abstracts from https://github.com/bepnye/EBM-NLP. Currently, titles and abstracts only are annotated using Population, Intervention and Outcome labels, as well as more fine-grained labels such as Age, Drug, Mortality and others.69.6 KSimon Susterssuster2023-11-27Developing
CORD-19-Sentences 13.4 MJin-Dong Kim2023-11-24Testing
CORD-19-SciBite-sentences 11.2 KJin-Dong Kim2023-11-26Testing
CORD-19-sample-UBERON 54Jin-Dong Kim2023-11-26Developing
CORD-19-sample-sentences 161Jin-Dong Kim2023-11-27Developing
CORD-19-sample-paragraphs 28Jin-Dong Kim2023-11-29Developing
CORD-19-sample-MONDO 113Jin-Dong Kim2023-11-29Developing
Name T# Ann.AuthorMaintainerUpdated_atStatus

461-480 / 590 show all
DisGeNet-2017-sample 2.93 KJin-Dong Kim2023-11-29Testing
DisGeNET 3.12 MNuria Queralt Jin-Dong Kim2023-11-24Beta
disease_ontology_term_microbe 5evangelos2023-11-29Developing
Disease_Markers 0Sophie Nam2023-11-29
disease_gene_microbe_small 536evangelos2023-11-27Testing
demo4TogoSite 323AikoHIRAKI2023-11-26Developing
dailymed_spl 0micheldumontier2023-11-29Developing
CyanoBase 1.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
craft-sa-dev 490 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-27Released
craft-ca-core-ex-dev 90.2 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-ca-core-dev 59.8 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
Covid19_manual_annotation_v2 4.58 KAikoHIRAKI2023-11-24Developing
Covid19_manual_annotation 5.1 KAikoHIRAKI2023-11-29Developing
CORD-PICO 69.6 KSimon Susterssuster2023-11-27Developing
CORD-19-Sentences 13.4 MJin-Dong Kim2023-11-24Testing
CORD-19-SciBite-sentences 11.2 KJin-Dong Kim2023-11-26Testing
CORD-19-sample-UBERON 54Jin-Dong Kim2023-11-26Developing
CORD-19-sample-sentences 161Jin-Dong Kim2023-11-27Developing
CORD-19-sample-paragraphs 28Jin-Dong Kim2023-11-29Developing
CORD-19-sample-MONDO 113Jin-Dong Kim2023-11-29Developing