Molecular_Biology  

Documents (334) JSON TSV

source DB source ID text size updated at # proj. # Ann. updated_at
PMC 6286601 Regmex: a statistical tool for exploring motifs in ranked sequence lists from genomics experiments Abstract Background Motif analysis methods have long been central for studying biological function o 40.7 KB 2020-12-02 3
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PMC 1524773 On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences Abstract Given a set S of n locally aligned sequences, it is a needed prerequisite to partitio 60.5 KB 2020-12-30 4
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PMC 1481596 Decomposition of overlapping protein complexes: A graph theoretical method for analyzing static and dynamic protein associations Abstract Background Most cellular processes are carried out by multi-p 37.7 KB 2020-12-30 4
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PMC 1481597 Multiple sequence alignment with user-defined anchor points Abstract Background Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situatio 43.4 KB 2020-12-30 4
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PMC 1459172 Partition function and base pairing probabilities of RNA heterodimers Abstract Background RNA has been recognized as a key player in cellular regulation in recent years. In many cases, non-coding RNA 32 KB 2020-12-30 4
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PMC 1471791 Finding the region of pseudo-periodic tandem repeats in biological sequences Abstract Summary The genomes of many species are dominated by short sequences repeated consecutively. It is estimated that 22 KB 2020-12-30 4
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PMC 1526732 P-value based visualization of codon usage data Abstract Two important and not yet solved problems in bacterial genome research are the identification of horizontally transferred genes and the predic 16.8 KB 2020-12-30 4
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PMC 1570349 Inverse bifurcation analysis: application to simple gene systems Abstract Background Bifurcation analysis has proven to be a powerful method for understanding the qualitative behavior of gene regulat 28.5 KB 2020-12-30 4
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PMC 1635054 Reconstructing protein structure from solvent exposure using tabu search Abstract Background A new, promising solvent exposure measure, called half-sphere-exposure (HSE), has recently been proposed. 29.7 KB 2020-12-30 4
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PMC 1635699 An enhanced RNA alignment benchmark for sequence alignment programs Abstract Background The performance of alignment programs is traditionally tested on sets of protein sequences, of which a referenc 30 KB 2020-12-30 4
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