Id |
Subject |
Object |
Predicate |
Lexical cue |
T635 |
0-6 |
Sentence |
denotes |
3.6.5. |
T636 |
7-13 |
Sentence |
denotes |
SALMON |
T637 |
14-191 |
Sentence |
denotes |
Solvent accessibility, ligand binding, and mapping of ligand orientation by NMR spectroscopy (SALMON) is another method based on the data obtained via nuclear Overhauser effect. |
T638 |
192-450 |
Sentence |
denotes |
This method utilizes WaterLOGSY [401] to probe for solvent accessibility to the ligand and determine the orientation of the ligand by analyzing signal changes in WaterLOGSY spectra (positive signal from unbound ligand vs. negative for protein-bound ligands). |
T639 |
451-642 |
Sentence |
denotes |
This method was first used to determine the orientation of prodrug called tretazicar ((5-(aziridin-1-yl)-2,4-dinitrobenzamide) known as CB1954 in NQO2 (quinone oxidoreductase 2) binding site. |
T640 |
643-858 |
Sentence |
denotes |
Previous attempts had been made to obtain the orientation of tretazicar bounded to NQO2, however the results obtained from X-ray crystallography were inconclusive as two orientations of tretazicar could be possible. |
T641 |
859-1085 |
Sentence |
denotes |
The information obtained via SALMON showed that the side chain of asparagine at position 161 formed a hydrogen bond with 2-nitrogroup of tretazicar, and that the aziridine moiety of tretazicar pointed toward the solvent [401]. |