| Id |
Subject |
Object |
Predicate |
Lexical cue |
| T143 |
0-6 |
Sentence |
denotes |
2.1.4. |
| T144 |
8-35 |
Sentence |
denotes |
Protein-ligand interactions |
| T145 |
36-219 |
Sentence |
denotes |
LigPlot+ was used to investigate protein-ligand interactions for a given .pdb file containing the docked conformation and also the final simulated conformation (Wallace et al., 1995). |
| T146 |
220-315 |
Sentence |
denotes |
The LigPlot+ program self-generated schematic 2D representations of protein-ligand interaction. |
| T147 |
316-469 |
Sentence |
denotes |
The output file represents the intermolecular interactions and their strengths, including hydrogen bonds, hydrophobic contacts, and atom accessibilities. |
| T148 |
470-602 |
Sentence |
denotes |
H-bonds are shown in green dotted lines, whereas residues involved in hydrophobic interaction are represented in the red semicircle. |
