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PubMed:32188728 JSONTXT 32 Projects

Annnotations TAB TSV DIC JSON TextAE

Id Subject Object Predicate Lexical cue
tok1 0-10 NNP denotes Structure-
tok2 10-16 NNP denotes Guided
tok3 17-28 NNP denotes Mutagenesis
tok4 29-35 NNP denotes Alters
tok5 36-52 NNP denotes Deubiquitinating
tok6 53-61 NN denotes Activity
tok7 62-65 CC denotes and
tok8 66-76 NNP denotes Attenuates
tok9 77-89 NNP denotes Pathogenesis
tok10 90-92 IN denotes of
tok11 93-94 DT denotes a
tok12 95-101 NNP denotes Murine
tok13 102-113 NNP denotes Coronavirus
tok14 113-114 . denotes .
tok15 115-128 NNP denotes Coronaviruses
tok16 129-136 VB denotes express
event21 129-136 OCCURRENCE denotes express
tok17 137-138 DT denotes a
tok18 139-154 NN denotes multifunctional
tok19 155-166 JJ denotes papain-like
tok20 167-175 NN denotes protease
tok21 175-176 , denotes ,
tok22 177-183 VBD denotes termed
tok23 184-187 NNP denotes PLP
tok24 187-188 CD denotes 2
tok25 188-189 . denotes .
tok26 190-193 NNP denotes PLP
tok27 193-194 CD denotes 2
tok28 195-199 NNS denotes acts
tok29 200-202 IN denotes as
lookup1 200-202 country_code denotes as
tok30 203-204 DT denotes a
tok31 205-213 NN denotes protease
tok32 214-218 IN denotes that
tok33 219-226 NNS denotes cleaves
tok34 227-230 DT denotes the
tok35 231-236 JJ denotes viral
tok36 237-246 NN denotes replicase
tok37 247-258 NN denotes polyprotein
tok38 258-259 , denotes ,
tok39 260-263 CC denotes and
tok40 264-265 DT denotes a
tok41 266-282 VBG denotes deubiquitinating
event18 266-282 OCCURRENCE denotes deubiquitinating
tok42 283-284 ( denotes (
tok43 284-287 NNP denotes DUB
tok44 287-288 ) denotes )
tok45 289-295 NN denotes enzyme
tok46 296-301 WDT denotes which
tok47 302-309 VBZ denotes removes
tok48 310-319 NN denotes ubiquitin
tok49 320-328 NNS denotes moieties
tok50 329-333 IN denotes from
tok51 334-354 JJ denotes ubiquitin-conjugated
tok52 355-363 NNS denotes proteins
tok53 363-364 . denotes .
tok54 365-373 JJ denotes Previous
tok55 374-376 IN denotes in
lookup2 374-376 country_code denotes in
tok56 377-382 NN denotes vitro
tok57 383-390 NNS denotes studies
tok58 391-401 VBN denotes implicated
tok59 402-405 NNP denotes PLP
tok60 405-406 CD denotes 2
tok61 407-410 NNP denotes DUB
tok62 411-419 NN denotes activity
tok63 420-422 IN denotes as
lookup3 420-422 country_code denotes as
tok64 423-424 DT denotes a
tok65 425-433 JJ denotes negative
tok66 434-443 NN denotes regulator
lookup4 434-443 jobtitle denotes regulator
tok67 444-446 IN denotes of
tok68 447-450 DT denotes the
tok69 451-455 NN denotes host
tok70 456-466 NN denotes interferon
tok71 467-468 ( denotes (
tok72 468-471 NNP denotes IFN
tok73 471-472 ) denotes )
tok74 473-481 NN denotes response
tok75 481-482 , denotes ,
tok76 483-486 CC denotes but
tok77 487-490 DT denotes the
tok78 491-495 NN denotes role
tok79 496-498 IN denotes of
tok80 499-502 NNP denotes DUB
tok81 503-511 NN denotes activity
tok82 512-518 IN denotes during
tok83 519-524 NN denotes virus
tok84 525-534 NN denotes infection
tok85 535-538 VBD denotes was
tok86 539-546 JJ denotes unknown
tok87 546-547 . denotes .
tok88 548-552 RB denotes Here
lookup5 548-552 stop denotes Here
tok89 552-553 , denotes ,
tok90 554-556 PRP denotes we
tok91 557-561 VBD denotes used
event31 557-561 OCCURRENCE denotes used
tok92 562-564 NNP denotes X-
tok93 564-567 NN denotes ray
lookup6 564-567 person_first denotes ray
tok94 568-584 JJ denotes structure-guided
tok95 585-596 NNS denotes mutagenesis
tok96 597-600 CC denotes and
tok97 601-611 JJ denotes functional
tok98 612-619 NNS denotes studies
tok99 620-622 TO denotes to
lookup7 620-622 country_code denotes to
tok100 623-631 VB denotes identify
event1 623-631 OCCURRENCE denotes identify
tok101 632-637 JJ denotes amino
tok102 638-642 NN denotes acid
tok103 643-656 NNS denotes substitutions
tok104 657-663 IN denotes within
tok105 664-667 DT denotes the
tok106 668-685 JJ denotes ubiquitin-binding
tok107 686-693 NN denotes surface
tok108 694-696 IN denotes of
tok109 697-700 NNP denotes PLP
tok110 700-701 CD denotes 2
tok111 702-706 WDT denotes that
tok112 707-714 VBD denotes reduced
event12 707-714 OCCURRENCE denotes reduced
tok113 715-718 NNP denotes DUB
tok114 719-727 NN denotes activity
tok115 728-735 IN denotes without
tok116 736-745 VBG denotes affecting
event4 736-745 OCCURRENCE denotes affecting
tok117 746-757 NN denotes polyprotein
tok118 758-768 NN denotes processing
tok119 769-777 NN denotes activity
tok120 777-778 . denotes .
tok121 779-781 PRP denotes We
lookup8 779-781 stop denotes We
tok122 782-792 VBN denotes engineered
event26 782-792 OCCURRENCE denotes engineered
tok123 793-794 DT denotes a
tok124 795-798 NNP denotes DUB
tok125 799-807 NN denotes mutation
tok126 808-809 ( denotes (
tok127 809-812 NNP denotes Asp
tok128 812-816 CD denotes 1772
tok129 817-819 TO denotes to
lookup9 817-819 country_code denotes to
tok130 820-823 NNP denotes Ala
lookup10 820-823 person_first denotes Ala
tok131 823-824 ) denotes )
tok132 825-829 IN denotes into
tok133 830-831 DT denotes a
tok134 832-838 NN denotes murine
tok135 839-850 JJ denotes coronavirus
tok136 851-854 CC denotes and
tok137 855-864 VBD denotes evaluated
event27 855-864 OCCURRENCE denotes evaluated
tok138 865-868 DT denotes the
tok139 869-880 NN denotes replication
tok140 881-884 CC denotes and
tok141 885-897 NNS denotes pathogenesis
tok142 898-900 IN denotes of
tok143 901-904 DT denotes the
tok144 905-908 NNP denotes DUB
tok145 909-915 JJ denotes mutant
tok146 916-921 NN denotes virus
tok147 922-923 ( denotes (
tok148 923-929 NNP denotes DUBmut
tok149 929-930 ) denotes )
tok150 931-933 IN denotes in
lookup11 931-933 country_code denotes in
tok151 934-942 JJ denotes cultured
tok152 943-954 NNS denotes macrophages
tok153 955-958 CC denotes and
tok154 959-961 IN denotes in
lookup12 959-961 country_code denotes in
tok155 962-966 NNS denotes mice
tok156 966-967 . denotes .
tok157 968-970 PRP denotes We
lookup13 968-970 stop denotes We
tok158 971-976 VBD denotes found
event6 971-976 OCCURRENCE denotes found
tok159 977-981 IN denotes that
tok160 982-985 DT denotes the
tok161 986-992 NNP denotes DUBmut
tok162 993-998 NN denotes virus
tok163 999-1009 NNS denotes replicates
tok164 1010-1019 RB denotes similarly
tok165 1020-1022 IN denotes as
lookup14 1020-1022 country_code denotes as
tok166 1023-1026 DT denotes the
tok167 1027-1036 JJ denotes wild-type
tok168 1037-1042 NN denotes virus
tok169 1043-1045 IN denotes in
lookup15 1043-1045 country_code denotes in
tok170 1046-1054 JJ denotes cultured
tok171 1055-1060 NNS denotes cells
tok172 1060-1061 , denotes ,
tok173 1062-1065 CC denotes but
tok174 1066-1069 DT denotes the
tok175 1070-1076 NNP denotes DUBmut
tok176 1077-1082 NN denotes virus
tok177 1083-1092 NNS denotes activates
tok178 1093-1095 DT denotes an
lookup16 1093-1095 country_code denotes an
tok179 1096-1099 NNP denotes IFN
tok180 1100-1108 NN denotes response
tok181 1109-1111 IN denotes at
lookup17 1109-1111 country_code denotes at
tok182 1112-1119 JJR denotes earlier
tok183 1120-1125 NNS denotes times
tok184 1126-1134 VBN denotes compared
event32 1126-1134 I_ACTION denotes compared
tok185 1135-1137 TO denotes to
lookup18 1135-1137 country_code denotes to
tok186 1138-1141 DT denotes the
tok187 1142-1151 JJ denotes wild-type
tok188 1152-1157 NN denotes virus
tok189 1158-1167 NN denotes infection
tok190 1168-1170 IN denotes in
lookup19 1168-1170 country_code denotes in
tok191 1171-1182 NNS denotes macrophages
tok192 1182-1183 , denotes ,
tok193 1184-1194 JJ denotes consistent
tok194 1195-1199 IN denotes with
tok195 1200-1203 NNP denotes DUB
tok196 1204-1212 NN denotes activity
tok197 1213-1223 RB denotes negatively
tok198 1224-1234 VBG denotes regulating
event34 1224-1234 OCCURRENCE denotes regulating
tok199 1235-1238 DT denotes the
tok200 1239-1242 NNP denotes IFN
tok201 1243-1251 NN denotes response
tok202 1251-1252 . denotes .
tok203 1253-1255 PRP denotes We
lookup20 1253-1255 stop denotes We
tok204 1256-1264 VBD denotes compared
tok205 1265-1268 DT denotes the
tok206 1269-1281 NNS denotes pathogenesis
tok207 1282-1284 IN denotes of
tok208 1285-1288 DT denotes the
tok209 1289-1295 NNP denotes DUBmut
tok210 1296-1301 NN denotes virus
tok211 1302-1304 TO denotes to
lookup21 1302-1304 country_code denotes to
tok212 1305-1308 DT denotes the
tok213 1309-1318 JJ denotes wild-type
tok214 1319-1324 NN denotes virus
tok215 1325-1328 CC denotes and
tok216 1329-1334 VBD denotes found
event30 1329-1334 OCCURRENCE denotes found
tok217 1335-1339 IN denotes that
tok218 1340-1343 DT denotes the
tok219 1344-1359 NNP denotes DUBmut-infected
tok220 1360-1364 NNS denotes mice
tok221 1365-1368 VBD denotes had
event2 1365-1368 STATE denotes had
tok222 1369-1370 DT denotes a
tok223 1371-1384 RB denotes statistically
tok224 1385-1396 JJ denotes significant
tok225 1397-1406 NN denotes reduction
tok226 1407-1408 ( denotes (
tok227 1408-1409 NN denotes p
lookup22 1408-1409 currency_unit denotes p
tok228 1409-1410 NN denotes <
tok229 1410-1411 CD denotes 0
tok230 1411-1412 . denotes .
tok231 1412-1414 CD denotes 05
tok232 1414-1415 ) denotes )
tok233 1416-1418 IN denotes in
lookup23 1416-1418 country_code denotes in
tok234 1419-1424 JJ denotes viral
tok235 1425-1430 NN denotes titer
tok236 1431-1433 IN denotes in
lookup24 1431-1433 country_code denotes in
tok237 1434-1440 NNS denotes livers
tok238 1441-1444 CC denotes and
tok239 1445-1452 NNS denotes spleens
tok240 1453-1455 IN denotes at
lookup25 1453-1455 country_code denotes at
tok241 1456-1459 NN denotes day
lookup26 1456-1459 date_unit denotes day
tok242 1460-1461 CD denotes 5
tok243 1462-1476 JJ denotes post-infection
tok244 1476-1477 , denotes ,
tok245 1478-1484 IN denotes albeit
tok246 1485-1489 DT denotes both
tok247 1490-1499 JJ denotes wild-type
tok248 1500-1503 CC denotes and
tok249 1504-1510 NNP denotes DUBmut
tok250 1511-1516 NN denotes virus
tok251 1517-1527 NNS denotes infections
tok252 1528-1536 VBD denotes resulted
event19 1528-1536 OCCURRENCE denotes resulted
tok253 1537-1539 IN denotes in
lookup27 1537-1539 country_code denotes in
tok254 1540-1547 JJ denotes similar
tok255 1548-1553 NN denotes liver
tok256 1554-1563 NN denotes pathology
tok257 1563-1564 . denotes .
tok258 1565-1572 RB denotes Overall
tok259 1572-1573 , denotes ,
tok260 1574-1578 DT denotes this
lookup28 1574-1578 time_modifier denotes this
tok261 1579-1584 NN denotes study
tok262 1585-1597 VBZ denotes demonstrates
tok263 1598-1602 IN denotes that
tok264 1603-1619 JJ denotes structure-guided
tok265 1620-1631 NNS denotes mutagenesis
tok266 1632-1636 VBZ denotes aids
event33 1632-1636 OCCURRENCE denotes aids
tok267 1637-1640 DT denotes the
tok268 1641-1655 NN denotes identification
tok269 1656-1658 IN denotes of
tok270 1659-1667 JJ denotes critical
tok271 1668-1680 NNS denotes determinants
tok272 1681-1683 IN denotes of
tok273 1684-1687 NNP denotes PLP
tok274 1687-1688 CD denotes 2
tok275 1688-1689 : denotes -
tok276 1689-1698 NN denotes ubiquitin
tok277 1699-1706 JJ denotes complex
tok278 1706-1707 , denotes ,
tok279 1708-1711 CC denotes and
tok280 1712-1716 IN denotes that
tok281 1717-1720 NNP denotes PLP
tok282 1720-1721 CD denotes 2
tok283 1722-1725 NNP denotes DUB
tok284 1726-1734 NN denotes activity
tok285 1735-1740 VBZ denotes plays
event14 1735-1740 OCCURRENCE denotes plays
tok286 1741-1742 DT denotes a
tok287 1743-1747 NN denotes role
tok288 1748-1750 IN denotes as
lookup29 1748-1750 country_code denotes as
tok289 1751-1753 DT denotes an
lookup30 1751-1753 country_code denotes an
tok290 1754-1764 NN denotes interferon
tok291 1765-1775 NN denotes antagonist
tok292 1776-1778 IN denotes in
lookup31 1776-1778 country_code denotes in
tok293 1779-1790 JJ denotes coronavirus
tok294 1791-1803 NNS denotes pathogenesis
tok295 1803-1804 . denotes .
tok296 1804-1814 NNP denotes IMPORTANCE
tok297 1815-1828 NNP denotes Coronaviruses
tok298 1829-1835 VB denotes employ
event23 1829-1835 OCCURRENCE denotes employ
tok299 1836-1837 DT denotes a
tok300 1838-1845 JJ denotes genetic
tok301 1846-1853 NN denotes economy
tok302 1854-1856 IN denotes by
lookup32 1854-1856 country_code denotes by
tok303 1857-1865 VBG denotes encoding
event29 1857-1865 OCCURRENCE denotes encoding
tok304 1866-1881 NN denotes multifunctional
tok305 1882-1890 NNS denotes proteins
tok306 1891-1895 WDT denotes that
tok307 1896-1904 NN denotes function
tok308 1905-1907 IN denotes in
lookup33 1905-1907 country_code denotes in
tok309 1908-1913 JJ denotes viral
tok310 1914-1925 NN denotes replication
tok311 1926-1929 CC denotes and
tok312 1930-1934 RB denotes also
tok313 1935-1941 VB denotes modify
event5 1935-1941 OCCURRENCE denotes modify
tok314 1942-1945 DT denotes the
tok315 1946-1950 NN denotes host
tok316 1951-1962 NN denotes environment
tok317 1963-1965 TO denotes to
lookup34 1963-1965 country_code denotes to
tok318 1966-1972 VB denotes disarm
event10 1966-1972 OCCURRENCE denotes disarm
tok319 1973-1976 DT denotes the
tok320 1977-1983 JJ denotes innate
tok321 1984-1990 JJ denotes immune
tok322 1991-1999 NN denotes response
tok323 1999-2000 . denotes .
tok324 2001-2004 DT denotes The
tok325 2005-2016 JJ denotes coronavirus
tok326 2017-2028 JJ denotes papain-like
tok327 2029-2037 NN denotes protease
tok328 2038-2039 CD denotes 2
tok329 2040-2041 ( denotes (
tok330 2041-2044 NNP denotes PLP
tok331 2044-2045 LS denotes 2
tok332 2045-2046 ) denotes )
tok333 2047-2053 NN denotes domain
tok334 2054-2063 VBZ denotes possesses
tok335 2064-2072 NN denotes protease
tok336 2073-2081 NN denotes activity
tok337 2081-2082 , denotes ,
tok338 2083-2088 WDT denotes which
tok339 2089-2096 NNS denotes cleaves
tok340 2097-2100 DT denotes the
tok341 2101-2106 JJ denotes viral
tok342 2107-2116 NN denotes replicase
tok343 2117-2128 NN denotes polyprotein
tok344 2128-2129 , denotes ,
tok345 2130-2133 CC denotes and
tok346 2134-2138 RB denotes also
tok347 2139-2142 NNP denotes DUB
tok348 2143-2151 NN denotes activity
tok349 2152-2153 ( denotes (
lookup35 2153-2155 country_code denotes de
lookup36 2153-2155 surname denotes de
tok350 2153-2167 JJ denotes de-conjugating
tok351 2168-2177 NN denotes ubiquitin
tok352 2177-2178 NN denotes /
tok353 2178-2192 JJ denotes ubiquitin-like
tok354 2193-2202 NNS denotes molecules
tok355 2203-2207 IN denotes from
tok356 2208-2216 VBN denotes modified
event20 2208-2216 OCCURRENCE denotes modified
tok357 2217-2227 NNS denotes substrates
tok358 2227-2228 ) denotes )
tok359 2229-2234 VBG denotes using
event24 2229-2234 OCCURRENCE denotes using
tok360 2235-2244 JJ denotes identical
tok361 2245-2254 JJ denotes catalytic
tok362 2255-2263 NNS denotes residues
tok363 2263-2264 . denotes .
tok364 2265-2267 TO denotes To
tok365 2268-2276 VB denotes separate
event9 2268-2276 OCCURRENCE denotes separate
tok366 2277-2280 DT denotes the
tok367 2281-2284 NNP denotes DUB
tok368 2285-2293 NN denotes activity
tok369 2294-2298 IN denotes from
tok370 2299-2302 DT denotes the
tok371 2303-2311 NN denotes protease
tok372 2312-2320 NN denotes activity
tok373 2320-2321 , denotes ,
tok374 2322-2324 PRP denotes we
tok375 2325-2333 VBN denotes employed
event13 2325-2333 OCCURRENCE denotes employed
tok376 2334-2335 DT denotes a
tok377 2336-2352 JJ denotes structure-guided
tok378 2353-2364 NNS denotes mutagenesis
tok379 2365-2373 VBP denotes approach
event17 2365-2373 I_STATE denotes approach
tok380 2374-2377 CC denotes and
tok381 2378-2388 VBN denotes identified
event7 2378-2388 OCCURRENCE denotes identified
tok382 2389-2397 NNS denotes residues
tok383 2398-2402 WDT denotes that
tok384 2403-2406 VBP denotes are
tok385 2407-2416 JJ denotes important
tok386 2417-2420 IN denotes for
tok387 2421-2438 JJ denotes ubiquitin-binding
tok388 2438-2439 . denotes .
tok389 2440-2442 PRP denotes We
lookup37 2440-2442 stop denotes We
tok390 2443-2448 VBD denotes found
event11 2443-2448 OCCURRENCE denotes found
tok391 2449-2453 IN denotes that
tok392 2454-2462 VBG denotes mutating
event28 2454-2462 OCCURRENCE denotes mutating
tok393 2463-2466 DT denotes the
tok394 2467-2484 JJ denotes ubiquitin-binding
tok395 2485-2493 NNS denotes residues
tok396 2494-2501 NNS denotes results
tok397 2502-2504 IN denotes in
lookup38 2502-2504 country_code denotes in
tok398 2505-2506 DT denotes a
tok399 2507-2510 NNP denotes PLP
tok400 2510-2511 CD denotes 2
tok401 2512-2516 WDT denotes that
tok402 2517-2520 VBZ denotes has
tok403 2521-2528 VBN denotes reduced
event8 2521-2528 OCCURRENCE denotes reduced
tok404 2529-2532 NNP denotes DUB
tok405 2533-2541 NN denotes activity
tok406 2542-2545 CC denotes but
tok407 2546-2553 VBZ denotes retains
tok408 2554-2562 NN denotes protease
tok409 2563-2571 NN denotes activity
tok410 2571-2572 . denotes .
tok411 2573-2575 PRP denotes We
lookup39 2573-2575 stop denotes We
tok412 2576-2586 VBN denotes engineered
event3 2576-2586 OCCURRENCE denotes engineered
tok413 2587-2588 DT denotes a
tok414 2589-2600 JJ denotes recombinant
tok415 2601-2607 NN denotes murine
tok416 2608-2619 JJ denotes coronavirus
tok417 2620-2622 TO denotes to
lookup40 2620-2622 country_code denotes to
tok418 2623-2630 VB denotes express
event22 2623-2630 OCCURRENCE denotes express
tok419 2631-2634 DT denotes the
tok420 2635-2638 NNP denotes DUB
tok421 2639-2645 JJ denotes mutant
tok422 2646-2649 CC denotes and
tok423 2650-2656 VBD denotes showed
event25 2650-2656 OCCURRENCE denotes showed
tok424 2657-2661 IN denotes that
tok425 2662-2665 DT denotes the
tok426 2666-2669 NNP denotes DUB
tok427 2670-2676 JJ denotes mutant
tok428 2677-2682 NN denotes virus
tok429 2683-2692 VBN denotes activated
event16 2683-2692 OCCURRENCE denotes activated
tok430 2693-2695 DT denotes an
lookup41 2693-2695 country_code denotes an
tok431 2696-2703 JJR denotes earlier
tok432 2704-2708 NN denotes type
tok433 2709-2710 PRP denotes I
lookup42 2709-2710 stop denotes I
tok434 2711-2721 NN denotes interferon
tok435 2722-2730 NN denotes response
tok436 2731-2733 IN denotes in
lookup43 2731-2733 country_code denotes in
tok437 2734-2745 NNS denotes macrophages
tok438 2746-2749 CC denotes and
tok439 2750-2759 VBN denotes exhibited
tok440 2760-2767 VBN denotes reduced
event15 2760-2767 OCCURRENCE denotes reduced
tok441 2768-2779 NN denotes replication
tok442 2780-2782 IN denotes in
lookup44 2780-2782 country_code denotes in
tok443 2783-2787 NNS denotes mice
tok444 2787-2788 . denotes .
tok445 2789-2792 DT denotes The
tok446 2793-2800 NNS denotes results
tok447 2801-2803 IN denotes of
tok448 2804-2808 DT denotes this
lookup45 2804-2808 time_modifier denotes this
tok449 2809-2814 NN denotes study
tok450 2815-2826 VB denotes demonstrate
tok451 2827-2831 IN denotes that
tok452 2832-2835 NNP denotes PLP
tok453 2835-2836 CD denotes 2
tok454 2836-2837 NN denotes /
tok455 2837-2840 NNP denotes DUB
tok456 2841-2843 VBZ denotes is
lookup46 2841-2843 country_code denotes is
tok457 2844-2846 DT denotes an
lookup47 2844-2846 country_code denotes an
tok458 2847-2857 NN denotes interferon
tok459 2858-2868 NN denotes antagonist
tok460 2869-2872 CC denotes and
tok461 2873-2874 DT denotes a
tok462 2875-2884 NN denotes virulence
tok463 2885-2890 NN denotes trait
tok464 2891-2893 IN denotes of
tok465 2894-2907 NNS denotes coronaviruses
tok466 2907-2908 . denotes .