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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 26-29 protein denotes Nmi
T2 35-40 protein denotes Stat5
T3 45-50 protein denotes Stat1
T4 54-58 protein denotes IL-2
T5 64-72 protein denotes IFNgamma
T6 125-131 protein denotes Stat5b
T7 207-210 protein denotes Nmi
T8 268-273 protein denotes N-Myc
T9 307-310 protein denotes Nmi
T10 330-335 protein denotes STATs
T11 343-348 protein denotes Stat2
T12 385-389 protein denotes IL-2
T13 394-402 protein denotes IFNgamma
T14 425-428 protein denotes Nmi
T15 438-442 protein denotes STAT
T16 487-496 protein denotes cytokines
T17 513-516 protein denotes Nmi
T18 536-569 protein denotes transcriptional activation domain
T19 580-583 protein denotes Nmi
T20 612-641 protein denotes CBP/p300 coactivator proteins
T21 647-652 protein denotes Stat1
T22 657-662 protein denotes Stat5
T23 682-690 protein denotes CBP/p300
T24 788-791 protein denotes Nmi
T25 807-811 protein denotes STAT
T26 945-984 protein denotes sequence-specific transcription factors

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-92 Sentence denotes Functional association of Nmi with Stat5 and Stat1 in IL-2- and IFNgamma-mediated signaling.
S2 93-285 Sentence denotes Using the coiled-coil region of Stat5b as the bait in a yeast two-hybrid screen, we identified the association of Nmi, a protein of unknown function previously reported as an N-Myc interactor.
S3 286-349 Sentence denotes We further show that Nmi interacts with all STATs except Stat2.
S4 350-497 Sentence denotes We evaluated two cytokine systems, IL-2 and IFNgamma, and demonstrate that Nmi augments STAT-mediated transcription in response to these cytokines.
S5 498-746 Sentence denotes Interestingly, Nmi lacks an intrinsic transcriptional activation domain; instead, Nmi enhances the association of CBP/p300 coactivator proteins with Stat1 and Stat5, and together with CBP/p300 can augment IL-2- and IFNgamma-dependent transcription.
S6 747-985 Sentence denotes Therefore, our data not only reveal that Nmi can potentiate STAT-dependent transcription, but also suggest that it can augment coactivator protein recruitment to at least some members of a group of sequence-specific transcription factors.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 26-29 NP denotes Nmi
C2 35-50 NP denotes Stat5 and Stat1
C3 207-210 NP denotes Nmi
C4 212-284 NP denotes a protein of unknown function previously reported as an N-Myc interactor
C5 307-310 NP denotes Nmi
C6 363-383 NP denotes two cytokine systems
C7 385-402 NP denotes IL-2 and IFNgamma
C8 425-428 NP denotes Nmi
C9 481-496 NP denotes these cytokines
C10 513-516 NP denotes Nmi
C11 580-583 NP denotes Nmi
C12 612-641 NP denotes CBP/p300 coactivator proteins
C13 647-662 NP denotes Stat1 and Stat5
C14 682-690 NP denotes CBP/p300
C15 788-791 NP denotes Nmi
C16 859-861 NP denotes it
R1 C3 C1 coref-ident Nmi,Nmi
R2 C4 C3 coref-appos a protein of unknown function previously reported as an N-Myc interactor,Nmi
R3 C5 C3 coref-ident Nmi,Nmi
R4 C7 C6 coref-appos IL-2 and IFNgamma,two cytokine systems
R5 C8 C5 coref-ident Nmi,Nmi
R6 C9 C6 coref-ident these cytokines,two cytokine systems
R7 C10 C8 coref-ident Nmi,Nmi
R8 C11 C10 coref-ident Nmi,Nmi
R9 C13 C2 coref-ident Stat1 and Stat5,Stat5 and Stat1
R10 C14 C12 coref-ident CBP/p300,CBP/p300 coactivator proteins
R11 C15 C11 coref-ident Nmi,Nmi
R12 C16 C15 coref-pron it,Nmi

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 26-29 protein_molecule denotes Nmi
T2 35-40 protein_molecule denotes Stat5
T3 45-50 protein_molecule denotes Stat1
T4 54-58 protein_molecule denotes IL-2
T5 64-72 protein_molecule denotes IFNgamma
T6 125-131 protein_molecule denotes Stat5b
T7 149-154 mono_cell denotes yeast
T8 207-210 protein_molecule denotes Nmi
T9 268-273 protein_molecule denotes N-Myc
T10 307-310 protein_molecule denotes Nmi
T11 330-335 protein_family_or_group denotes STATs
T12 343-348 protein_molecule denotes Stat2
T13 385-389 protein_molecule denotes IL-2
T14 394-402 protein_molecule denotes IFNgamma
T15 425-428 protein_molecule denotes Nmi
T16 438-442 protein_family_or_group denotes STAT
T17 487-496 protein_family_or_group denotes cytokines
T18 513-516 protein_molecule denotes Nmi
T19 536-569 protein_domain_or_region denotes transcriptional activation domain
T20 580-583 protein_molecule denotes Nmi
T21 612-641 protein_family_or_group denotes CBP/p300 coactivator proteins
T22 647-652 protein_molecule denotes Stat1
T23 657-662 protein_molecule denotes Stat5
T24 682-690 protein_molecule denotes CBP/p300
T25 788-791 protein_molecule denotes Nmi
T26 807-811 protein_family_or_group denotes STAT
T27 945-984 protein_family_or_group denotes sequence-specific transcription factors

bionlp-st-gro-2013-development

Id Subject Object Predicate Lexical cue
T1 26-29 Protein denotes Nmi
T2 35-40 Protein denotes Stat5
T3 45-50 Protein denotes Stat1
T4 54-58 Protein denotes IL-2
T5 64-72 Protein denotes IFNgamma
T8 125-131 Protein denotes Stat5b
T9 207-210 Protein denotes Nmi
T10 214-221 Protein denotes protein
T11 268-273 Protein denotes N-Myc
T12 307-310 Protein denotes Nmi
T14 330-335 Protein denotes STATs
T15 367-375 Protein denotes cytokine
T16 385-389 Protein denotes IL-2
T17 394-402 Protein denotes IFNgamma
T18 425-428 Protein denotes Nmi
T20 438-442 Protein denotes STAT
T24 487-496 Protein denotes cytokines
T25 513-516 Protein denotes Nmi
T29 580-583 Protein denotes Nmi
T32 612-641 TranscriptionCoactivator denotes CBP/p300 coactivator proteins
T33 647-652 Protein denotes Stat1
T34 657-662 Protein denotes Stat5
T35 682-690 Protein denotes CBP/p300
T37 703-707 Protein denotes IL-2
T38 713-721 Protein denotes IFNgamma
T40 788-791 Protein denotes Nmi
T42 807-811 Protein denotes STAT
T45 874-893 TranscriptionCoactivator denotes coactivator protein
T47 963-984 TranscriptionFactor denotes transcription factors
T26 536-569 ProteinDomain denotes transcriptional activation domain
E1 73-81 RegulatoryProcess denotes mediated
E2 82-91 SignalingPathway denotes signaling
E3 311-320 BindingToProtein denotes interacts
E4 429-437 PositiveRegulation denotes augments
E5 443-451 RegulatoryProcess denotes mediated
E6 452-465 Transcription denotes transcription
E7 469-477 ResponseProcess denotes response
E10 584-592 PositiveRegulation denotes enhances
E11 597-608 BindingToProtein denotes association
E12 695-702 PositiveRegulation denotes augment
E13 732-745 Transcription denotes transcription
E14 796-806 PositiveRegulation denotes potentiate
E15 822-835 Transcription denotes transcription
E16 866-873 PositiveRegulation denotes augment
E17 894-905 Transport denotes recruitment
E18 192-203 BindingToProtein denotes association
E8 73-81 RegulatoryProcess denotes mediated
R1 T4 E1 hasAgent IL-2,mediated
R2 E2 E1 hasPatient signaling,mediated
R3 T14 E3 hasPatient STATs,interacts
R4 T12 E3 hasPatient Nmi,interacts
R5 T18 E4 hasAgent Nmi,augments
R6 E6 E4 hasPatient transcription,augments
R7 T20 E5 hasAgent STAT,mediated
R8 E6 E5 hasPatient transcription,mediated
R9 T24 E7 hasAgent cytokines,response
R10 T29 E10 hasAgent Nmi,enhances
R11 E11 E10 hasPatient association,enhances
R12 T33 E11 hasPatient Stat1,association
R13 T34 E11 hasPatient Stat5,association
R14 T32 E11 hasPatient CBP/p300 coactivator proteins,association
R15 T35 E12 hasAgent CBP/p300,augment
R16 E13 E12 hasPatient transcription,augment
R17 T40 E14 hasAgent Nmi,potentiate
R18 E15 E14 hasPatient transcription,potentiate
R19 T40 E16 hasAgent Nmi,augment
R20 E17 E16 hasPatient recruitment,augment
R21 T45 E17 hasPatient coactivator protein,recruitment
R22 T8 E18 hasPatient Stat5b,association
R23 T9 E18 hasPatient Nmi,association
R24 T5 E8 hasAgent IFNgamma,mediated
R25 E2 E8 hasPatient signaling,mediated

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 612-615 Disease denotes CBP http://purl.obolibrary.org/obo/MONDO_0010565
T2 682-685 Disease denotes CBP http://purl.obolibrary.org/obo/MONDO_0010565