PubMed:32917722 / 267-557
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T2 | 127-143 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T3 | 138-143 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T4 | 71-80 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T5 | 182-190 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T6 | 207-215 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T7 | 269-277 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T8 | 280-289 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 3-7 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T3 | 127-137 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T4 | 138-143 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T5 | 240-241 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T4 | 45-56 | Chemical | denotes | sphingosine | http://purl.obolibrary.org/obo/CHEBI_16393 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-290 | Sentence | denotes | To test this hypothesis, we analyzed whether sphingosine regulates the infection of cultured and freshly isolated ex vivohuman epithelial cells with pseudoviral particles expressing SARS-CoV-2 spike (pp-VSV-SARS-CoV-2 spike) that served as a bona fide system mimicking SARS-CoV-2 infection. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 42 | 45-56 | Chemical | denotes | sphingosine | MESH:D013110 |
| 43 | 71-80 | Disease | denotes | infection | MESH:D007239 |
| 44 | 182-192 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 45 | 193-198 | Gene | denotes | spike | Gene:43740568 |
| 46 | 207-217 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 47 | 218-223 | Gene | denotes | spike | Gene:43740568 |
| 48 | 269-289 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-290 | Sentence | denotes | To test this hypothesis, we analyzed whether sphingosine regulates the infection of cultured and freshly isolated ex vivohuman epithelial cells with pseudoviral particles expressing SARS-CoV-2 spike (pp-VSV-SARS-CoV-2 spike) that served as a bona fide system mimicking SARS-CoV-2 infection. |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T4 | 71-80 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T5 | 182-192 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T6 | 207-217 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T7 | 269-279 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 280-289 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 182-190 | OrganismTaxon | denotes | SARS-CoV | 694009 |
| T3 | 207-215 | OrganismTaxon | denotes | SARS-CoV | 694009 |
| T4 | 269-277 | OrganismTaxon | denotes | SARS-CoV | 694009 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T3 | 127-143 | Body_part | denotes | epithelial cells | http://purl.obolibrary.org/obo/CL_0000066 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 127-143 | Cell | denotes | epithelial cells | http://purl.obolibrary.org/obo/CL:0000066 |