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GoldHamster

Id Subject Object Predicate Lexical cue
T3 25-44 UBERON:0001066 denotes intervertebral disc
T1 25-44 C535531 denotes intervertebral disc
T2 25-44 C535531 denotes intervertebral disc
T4 45-50 UBERON:0000062 denotes organ
T5 45-50 UBERON:0003103 denotes organ
T6 181-187 9913 denotes bovine
T7 193-198 UBERON:0000062 denotes organ
T8 193-198 UBERON:0003103 denotes organ
T9 224-228 original_id denotes term
T10 410-413 P0C135 denotes NEP
T11 410-413 PR:000001445 denotes NEP
T12 410-413 Q77ZM4 denotes NEP
T13 410-413 Q9Q0L7 denotes NEP
T14 410-413 O09688 denotes NEP
T15 410-413 A4GCK2 denotes NEP
T16 410-413 P12603 denotes NEP
T17 410-413 A8C8J9 denotes NEP
T18 410-413 Q77IX1 denotes NEP
T19 410-413 P17043 denotes NEP
T20 410-413 Q2RCH1 denotes NEP
T21 410-413 Q6XTD9 denotes NEP
T22 410-413 Q9ENX7 denotes NEP
T23 410-413 Q38SQ3 denotes NEP
T24 410-413 P0C5T8 denotes NEP
T25 410-413 P03509 denotes NEP
T26 410-413 P69259 denotes NEP
T27 410-413 Q1PUD4 denotes NEP
T28 410-413 O57273 denotes NEP
T29 410-413 Q0A2I2 denotes NEP
T30 410-413 Q20PL9 denotes NEP
T31 410-413 Q2RFA1 denotes NEP
T32 410-413 O57269 denotes NEP
T33 410-413 Q67255 denotes NEP
T34 410-413 Q76MT9 denotes NEP
T35 410-413 P19621 denotes NEP
T36 410-413 P08275 denotes NEP
T37 410-413 P13144 denotes NEP
T38 410-413 Q67402 denotes NEP
T39 410-413 Q6DP67 denotes NEP
T40 410-413 Q2VC88 denotes NEP
T41 410-413 P69262 denotes NEP
T42 410-413 P0C5U0 denotes NEP
T43 410-413 P08014 denotes NEP
T44 410-413 Q2VNE8 denotes NEP
T45 410-413 O56263 denotes NEP
T46 410-413 Q288Z1 denotes NEP
T47 410-413 Q0HD55 denotes NEP
T48 410-413 Q8V3U1 denotes NEP
T49 410-413 P08049 denotes NEP
T50 410-413 Q2VNC8 denotes NEP
T51 410-413 Q463X0 denotes NEP
T52 410-413 Q2ICQ5 denotes NEP
T53 410-413 P69258 denotes NEP
T54 410-413 A4U7B1 denotes NEP
T55 410-413 Q20NC0 denotes NEP
T56 410-413 Q0A463 denotes NEP
T57 410-413 Q61391 denotes NEP
T58 410-413 P03505 denotes NEP
T59 410-413 P69260 denotes NEP
T60 410-413 P08271 denotes NEP
T61 410-413 P36350 denotes NEP
T62 410-413 Q1K9P8 denotes NEP
T63 410-413 P08473 denotes NEP
T64 410-413 P30915 denotes NEP
T65 410-413 Q5RE69 denotes NEP
T66 410-413 P0C142 denotes NEP
T67 410-413 P08273 denotes NEP
T68 410-413 Q76S20 denotes NEP
T69 410-413 B4URE1 denotes NEP
T70 410-413 P69269 denotes NEP
T71 410-413 P33493 denotes NEP
T72 410-413 P69263 denotes NEP
T73 410-413 Q0A3Q4 denotes NEP
T74 410-413 A8C8W8 denotes NEP
T75 410-413 A4GCJ1 denotes NEP
T76 410-413 Q6XSV5 denotes NEP
T77 410-413 Q3SBF1 denotes NEP
T78 410-413 Q01640 denotes NEP
T79 410-413 Q6XTK1 denotes NEP
T80 410-413 P0C2M0 denotes NEP
T81 410-413 B3EUR1 denotes NEP
T82 410-413 PR:000001898 denotes NEP
T83 410-413 P13148 denotes NEP
T84 410-413 Q910E4 denotes NEP
T85 410-413 Q6DP71 denotes NEP
T86 410-413 Q0A2H1 denotes NEP
T87 410-413 P0C5U3 denotes NEP
T88 410-413 P69265 denotes NEP
T89 410-413 Q04265 denotes NEP
T90 410-413 Q0A2Q9 denotes NEP
T91 410-413 A4GCL3 denotes NEP
T92 410-413 Q6DP36 denotes NEP
T93 410-413 P08269 denotes NEP
T94 410-413 P0C5U4 denotes NEP
T95 410-413 P03508 denotes NEP
T96 410-413 P21527 denotes NEP
T97 410-413 P11619 denotes NEP
T98 410-413 P0C5T7 denotes NEP
T99 410-413 P0C2M1 denotes NEP
T100 410-413 Q20NN8 denotes NEP
T101 410-413 O89747 denotes NEP
T102 410-413 O41650 denotes NEP
T103 410-413 P0C5T9 denotes NEP
T104 410-413 P30914 denotes NEP
T105 410-413 Q6XTC3 denotes NEP
T106 410-413 P13145 denotes NEP
T107 410-413 Q6DP69 denotes NEP
T108 410-413 A4U6V7 denotes NEP
T109 410-413 Q30NP6 denotes NEP
T110 410-413 Q3YPZ0 denotes NEP
T111 410-413 P03506 denotes NEP
T112 410-413 O57266 denotes NEP
T113 410-413 P30913 denotes NEP
T114 410-413 P0C5U1 denotes NEP
T115 410-413 Q6DP63 denotes NEP
T116 410-413 P13150 denotes NEP
T117 410-413 Q9ENZ3 denotes NEP
T118 410-413 P08277 denotes NEP
T119 410-413 P69257 denotes NEP
T120 410-413 P07861 denotes NEP
T121 410-413 P0C139 denotes NEP
T122 410-413 A4GCM4 denotes NEP
T123 410-413 P69264 denotes NEP
T124 410-413 A3DRP5 denotes NEP
T125 410-413 Q289M2 denotes NEP
T126 410-413 Q6DP65 denotes NEP
T127 410-413 O09680 denotes NEP
T128 410-413 A4GBY2 denotes NEP
T129 410-413 PR:Q08345 denotes NEP
T130 410-413 O89285 denotes NEP
T131 410-413 Q02600 denotes NEP
T132 410-413 P0C5U2 denotes NEP
T133 410-413 O09686 denotes NEP
T134 410-413 Q20P38 denotes NEP
T135 410-413 Q6XSW5 denotes NEP
T136 410-413 P69267 denotes NEP
T137 410-413 A4K148 denotes NEP
T138 410-413 Q6DP29 denotes NEP
T139 410-413 P69268 denotes NEP
T140 410-413 P69261 denotes NEP
T141 410-413 Q0A443 denotes NEP
T142 410-413 Q08IG7 denotes NEP
T143 410-413 Q07FI0 denotes NEP
T144 410-413 P03511 denotes NEP
T145 410-413 P13147 denotes NEP
T146 410-413 O57275 denotes NEP
T147 410-413 Q04266 denotes NEP
T148 410-413 P08279 denotes NEP
T149 410-413 O41648 denotes NEP
T150 410-413 P03504 denotes NEP
T151 410-413 P69266 denotes NEP
T152 410-413 P0C137 denotes NEP
T153 410-413 Q89733 denotes NEP
T154 458-467 UBERON:0002418 denotes cartilage
T155 458-467 UBERON:0007844 denotes cartilage
T156 479-482 GO:0047849 denotes CEP
T157 479-482 D017092 denotes CEP
T176 601-608 10890 denotes trypsin
T158 601-608 Q59149 denotes trypsin
T160 601-608 P70059 denotes trypsin
T161 601-608 P23916 denotes trypsin
T162 601-608 P00764 denotes trypsin
T163 601-608 P81071 denotes trypsin
T164 601-608 P35051 denotes trypsin
T165 601-608 P51588 denotes trypsin
T166 601-608 P83348 denotes trypsin
T167 601-608 P24664 denotes trypsin
T168 601-608 P00775 denotes trypsin
T169 601-608 O97399 denotes trypsin
T170 601-608 P19799 denotes trypsin
T171 601-608 P35048 denotes trypsin
T172 601-608 P35050 denotes trypsin
T173 601-608 P00761 denotes trypsin
T175 601-608 P35034 denotes trypsin
T177 601-608 P35049 denotes trypsin
T178 601-608 PR:000027795 denotes trypsin
T159 601-608 CHEBI:9765 denotes trypsin
T174 601-608 D014357 denotes trypsin
T179 628-634 CVCL_E031 denotes center
T180 684-690 UBERON:0027368 denotes matrix
T181 691-702 GO:0009056 denotes degradation
T182 717-724 Q59149 denotes Trypsin
T184 717-724 P70059 denotes Trypsin
T185 717-724 P23916 denotes Trypsin
T186 717-724 P00764 denotes Trypsin
T187 717-724 P81071 denotes Trypsin
T188 717-724 P35051 denotes Trypsin
T189 717-724 P51588 denotes Trypsin
T190 717-724 P83348 denotes Trypsin
T191 717-724 P24664 denotes Trypsin
T192 717-724 P00775 denotes Trypsin
T193 717-724 O97399 denotes Trypsin
T194 717-724 P19799 denotes Trypsin
T195 717-724 P35048 denotes Trypsin
T196 717-724 P35050 denotes Trypsin
T197 717-724 P00761 denotes Trypsin
T199 717-724 P35034 denotes Trypsin
T201 717-724 P35049 denotes Trypsin
T202 717-724 PR:000027795 denotes Trypsin
T200 717-724 10890 denotes Trypsin
T183 717-724 CHEBI:9765 denotes Trypsin
T198 717-724 D014357 denotes Trypsin
T203 818-821 P0C135 denotes NEP
T204 818-821 PR:000001445 denotes NEP
T205 818-821 Q77ZM4 denotes NEP
T206 818-821 Q9Q0L7 denotes NEP
T207 818-821 O09688 denotes NEP
T208 818-821 A4GCK2 denotes NEP
T209 818-821 P12603 denotes NEP
T210 818-821 A8C8J9 denotes NEP
T211 818-821 Q77IX1 denotes NEP
T212 818-821 P17043 denotes NEP
T213 818-821 Q2RCH1 denotes NEP
T214 818-821 Q6XTD9 denotes NEP
T215 818-821 Q9ENX7 denotes NEP
T216 818-821 Q38SQ3 denotes NEP
T217 818-821 P0C5T8 denotes NEP
T218 818-821 P03509 denotes NEP
T219 818-821 P69259 denotes NEP
T220 818-821 Q1PUD4 denotes NEP
T221 818-821 O57273 denotes NEP
T222 818-821 Q0A2I2 denotes NEP
T223 818-821 Q20PL9 denotes NEP
T224 818-821 Q2RFA1 denotes NEP
T225 818-821 O57269 denotes NEP
T226 818-821 Q67255 denotes NEP
T227 818-821 Q76MT9 denotes NEP
T228 818-821 P19621 denotes NEP
T229 818-821 P08275 denotes NEP
T230 818-821 P13144 denotes NEP
T231 818-821 Q67402 denotes NEP
T232 818-821 Q6DP67 denotes NEP
T233 818-821 Q2VC88 denotes NEP
T234 818-821 P69262 denotes NEP
T235 818-821 P0C5U0 denotes NEP
T236 818-821 P08014 denotes NEP
T237 818-821 Q2VNE8 denotes NEP
T238 818-821 O56263 denotes NEP
T239 818-821 Q288Z1 denotes NEP
T240 818-821 Q0HD55 denotes NEP
T241 818-821 Q8V3U1 denotes NEP
T242 818-821 P08049 denotes NEP
T243 818-821 Q2VNC8 denotes NEP
T244 818-821 Q463X0 denotes NEP
T245 818-821 Q2ICQ5 denotes NEP
T246 818-821 P69258 denotes NEP
T247 818-821 A4U7B1 denotes NEP
T248 818-821 Q20NC0 denotes NEP
T249 818-821 Q0A463 denotes NEP
T250 818-821 Q61391 denotes NEP
T251 818-821 P03505 denotes NEP
T252 818-821 P69260 denotes NEP
T253 818-821 P08271 denotes NEP
T254 818-821 P36350 denotes NEP
T255 818-821 Q1K9P8 denotes NEP
T256 818-821 P08473 denotes NEP
T257 818-821 P30915 denotes NEP
T258 818-821 Q5RE69 denotes NEP
T259 818-821 P0C142 denotes NEP
T260 818-821 P08273 denotes NEP
T261 818-821 Q76S20 denotes NEP
T262 818-821 B4URE1 denotes NEP
T263 818-821 P69269 denotes NEP
T264 818-821 P33493 denotes NEP
T265 818-821 P69263 denotes NEP
T266 818-821 Q0A3Q4 denotes NEP
T267 818-821 A8C8W8 denotes NEP
T268 818-821 A4GCJ1 denotes NEP
T269 818-821 Q6XSV5 denotes NEP
T270 818-821 Q3SBF1 denotes NEP
T271 818-821 Q01640 denotes NEP
T272 818-821 Q6XTK1 denotes NEP
T273 818-821 P0C2M0 denotes NEP
T274 818-821 B3EUR1 denotes NEP
T275 818-821 PR:000001898 denotes NEP
T302 818-821 Q30NP6 denotes NEP
T303 818-821 Q3YPZ0 denotes NEP
T304 818-821 P03506 denotes NEP
T305 818-821 O57266 denotes NEP
T306 818-821 P30913 denotes NEP
T307 818-821 P0C5U1 denotes NEP
T276 818-821 P13148 denotes NEP
T308 818-821 Q6DP63 denotes NEP
T277 818-821 Q910E4 denotes NEP
T278 818-821 Q6DP71 denotes NEP
T279 818-821 Q0A2H1 denotes NEP
T280 818-821 P0C5U3 denotes NEP
T281 818-821 P69265 denotes NEP
T282 818-821 Q04265 denotes NEP
T283 818-821 Q0A2Q9 denotes NEP
T284 818-821 A4GCL3 denotes NEP
T285 818-821 Q6DP36 denotes NEP
T286 818-821 P08269 denotes NEP
T287 818-821 P0C5U4 denotes NEP
T288 818-821 P03508 denotes NEP
T289 818-821 P21527 denotes NEP
T290 818-821 P11619 denotes NEP
T291 818-821 P0C5T7 denotes NEP
T292 818-821 P0C2M1 denotes NEP
T293 818-821 Q20NN8 denotes NEP
T294 818-821 O89747 denotes NEP
T295 818-821 O41650 denotes NEP
T296 818-821 P0C5T9 denotes NEP
T297 818-821 P30914 denotes NEP
T298 818-821 Q6XTC3 denotes NEP
T299 818-821 P13145 denotes NEP
T300 818-821 Q6DP69 denotes NEP
T301 818-821 A4U6V7 denotes NEP
T309 818-821 P13150 denotes NEP
T310 818-821 Q9ENZ3 denotes NEP
T311 818-821 P08277 denotes NEP
T312 818-821 P69257 denotes NEP
T313 818-821 P07861 denotes NEP
T314 818-821 P0C139 denotes NEP
T315 818-821 A4GCM4 denotes NEP
T316 818-821 P69264 denotes NEP
T317 818-821 A3DRP5 denotes NEP
T318 818-821 Q289M2 denotes NEP
T319 818-821 Q6DP65 denotes NEP
T320 818-821 O09680 denotes NEP
T321 818-821 A4GBY2 denotes NEP
T322 818-821 PR:Q08345 denotes NEP
T323 818-821 O89285 denotes NEP
T324 818-821 Q02600 denotes NEP
T325 818-821 P0C5U2 denotes NEP
T326 818-821 O09686 denotes NEP
T327 818-821 Q20P38 denotes NEP
T357 1242-1249 CHEBI:9765 denotes trypsin
T372 1242-1249 D014357 denotes trypsin
T377 1284-1290 CVCL_E031 denotes center
T378 1333-1341 D053674 denotes aggrecan
T379 1333-1341 D053674 denotes aggrecan
T380 1528-1540 CHEBI:37396 denotes proteoglycan
T382 1528-1540 D011509 denotes proteoglycan
T383 1528-1540 D011509 denotes proteoglycan
T328 818-821 Q6XSW5 denotes NEP
T381 1528-1540 GO:0005203 denotes proteoglycan
T384 1528-1550 GO:0030166 denotes proteoglycan synthesis
T386 1587-1596 GO:0009058 denotes synthesis
T405 1598-1605 10890 denotes Trypsin
T387 1598-1605 Q59149 denotes Trypsin
T389 1598-1605 P70059 denotes Trypsin
T390 1598-1605 P23916 denotes Trypsin
T391 1598-1605 P00764 denotes Trypsin
T392 1598-1605 P81071 denotes Trypsin
T393 1598-1605 P35051 denotes Trypsin
T394 1598-1605 P51588 denotes Trypsin
T395 1598-1605 P83348 denotes Trypsin
T329 818-821 P69267 denotes NEP
T396 1598-1605 P24664 denotes Trypsin
T397 1598-1605 P00775 denotes Trypsin
T398 1598-1605 O97399 denotes Trypsin
T330 818-821 A4K148 denotes NEP
T399 1598-1605 P19799 denotes Trypsin
T400 1598-1605 P35048 denotes Trypsin
T331 818-821 Q6DP29 denotes NEP
T401 1598-1605 P35050 denotes Trypsin
T402 1598-1605 P00761 denotes Trypsin
T404 1598-1605 P35034 denotes Trypsin
T406 1598-1605 P35049 denotes Trypsin
T407 1598-1605 PR:000027795 denotes Trypsin
T388 1598-1605 CHEBI:9765 denotes Trypsin
T332 818-821 P69268 denotes NEP
T403 1598-1605 D014357 denotes Trypsin
T408 1614-1620 9913 denotes bovine
T409 1621-1624 GO:0047849 denotes CEP
T410 1621-1624 D017092 denotes CEP
T333 818-821 P69261 denotes NEP
T334 818-821 Q0A443 denotes NEP
T335 818-821 Q08IG7 denotes NEP
T336 818-821 Q07FI0 denotes NEP
T337 818-821 P03511 denotes NEP
T338 818-821 P13147 denotes NEP
T339 818-821 O57275 denotes NEP
T340 818-821 Q04266 denotes NEP
T341 818-821 P08279 denotes NEP
T342 818-821 O41648 denotes NEP
T343 818-821 P03504 denotes NEP
T344 818-821 P69266 denotes NEP
T345 818-821 P0C137 denotes NEP
T346 818-821 Q89733 denotes NEP
T347 1054-1057 GO:0047849 denotes CEP
T348 1054-1057 D017092 denotes CEP
T349 1183-1188 CVCL_Z366 denotes mimic
T350 1189-1201 CHEBI:37396 denotes proteoglycan
T352 1189-1201 D011509 denotes proteoglycan
T353 1189-1201 D011509 denotes proteoglycan
T351 1189-1201 GO:0005203 denotes proteoglycan
T354 1214-1231 D055959 denotes disc degeneration
T355 1214-1231 D055959 denotes disc degeneration
T374 1242-1249 10890 denotes trypsin
T356 1242-1249 Q59149 denotes trypsin
T358 1242-1249 P70059 denotes trypsin
T359 1242-1249 P23916 denotes trypsin
T360 1242-1249 P00764 denotes trypsin
T361 1242-1249 P81071 denotes trypsin
T362 1242-1249 P35051 denotes trypsin
T363 1242-1249 P51588 denotes trypsin
T364 1242-1249 P83348 denotes trypsin
T365 1242-1249 P24664 denotes trypsin
T366 1242-1249 P00775 denotes trypsin
T367 1242-1249 O97399 denotes trypsin
T368 1242-1249 P19799 denotes trypsin
T369 1242-1249 P35048 denotes trypsin
T370 1242-1249 P35050 denotes trypsin
T371 1242-1249 P00761 denotes trypsin
T373 1242-1249 P35034 denotes trypsin
T375 1242-1249 P35049 denotes trypsin
T376 1242-1249 PR:000027795 denotes trypsin

PubMed_ArguminSci

Id Subject Object Predicate Lexical cue
T1 146-337 DRI_Background denotes The present work describes a novel bovine disc organ culture system with long-term maintenance of cell viability, in which degenerative changes can be induced as a prelude to studying repair.
T2 338-484 DRI_Approach denotes Discs were isolated with three different techniques: without endplates (NEP), with bony endplates (BEP) and with intact cartilage endplates (CEP).
T3 485-563 DRI_Background denotes Swelling, deformation, and cell viability were evaluated in unloaded cultures.
T4 564-716 DRI_Approach denotes Degeneration was induced by a single trypsin injection into the center of the disc and the effect on cell viability and matrix degradation was followed.
T5 717-817 DRI_Approach denotes Trypsin-treated discs were exposed to TGFβ to evaluate the potential to study repair in this system.
T6 818-1050 DRI_Approach denotes NEP isolated discs showed >75% maintained cell viability for up to 10 days but were severely deformed, BEP discs on the other hand maintained morphology but failed to retain cell viability having only 27% viable cells after 10 days.
T7 1051-1179 DRI_Outcome denotes In CEP discs, both cell viability and morphology were maintained for at least 4 weeks where >75% of the cells were still viable.
T8 1180-1303 DRI_Approach denotes To mimic proteoglycan loss during disc degeneration, a single trypsin injection was administered to the center of the disc.
T9 1304-1390 DRI_Approach denotes This resulted in 60% loss of aggrecan, after 7 days, without affecting cell viability.
T10 1391-1597 DRI_Outcome denotes When TGFβ was injected to validate that the system can be used to study a repair response following injection of a bio-active substance, proteoglycan synthesis nearly doubled compared to baseline synthesis.
T11 1598-1798 DRI_Background denotes Trypsin-treated bovine CEP discs therefore provide a model system for studying repair of the degenerate disc, as morphology, cell viability and responsiveness to bio-active substances were maintained.

Goldhamster2_Cellosaurus

Id Subject Object Predicate Lexical cue
T1 15-17 CVCL_8754|Cancer_cell_line|Homo sapiens denotes an
T2 15-17 CVCL_H241|Cancer_cell_line|Homo sapiens denotes an
T3 106-107 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T4 173-174 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T5 282-289 CVCL_0238|Cancer_cell_line|Homo sapiens denotes changes
T6 308-309 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T7 410-413 CVCL_IS66|Cancer_cell_line|Homo sapiens denotes NEP
T8 592-593 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T9 628-634 CVCL_E031|Induced_pluripotent_stem_cell|Homo sapiens denotes center
T10 818-821 CVCL_IS66|Cancer_cell_line|Homo sapiens denotes NEP
T11 1019-1021 CVCL_T366|Transformed_cell_line|Chlorocebus aethiops denotes 27
T12 1183-1188 CVCL_Z366|Spontaneously_immortalized_cell_line|Spodoptera frugiperda denotes mimic
T13 1233-1234 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T14 1284-1290 CVCL_E031|Induced_pluripotent_stem_cell|Homo sapiens denotes center
T15 1321-1323 CVCL_C917|Induced_pluripotent_stem_cell|Homo sapiens denotes 60
T16 1463-1464 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T17 1504-1505 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T18 1510-1516 CVCL_C410|Hybridoma|Mus musculus denotes active
T19 1649-1650 CVCL_6479|Finite_cell_line|Mus musculus denotes a
T20 1764-1770 CVCL_C410|Hybridoma|Mus musculus denotes active

Allie

Id Subject Object Predicate Lexical cue
SS1_21336509_2_0 421-435 expanded denotes bony endplates
SS2_21336509_2_0 437-440 abbr denotes BEP
SS1_21336509_2_1 458-477 expanded denotes cartilage endplates
SS2_21336509_2_1 479-482 abbr denotes CEP
AE1_21336509_2_0 SS1_21336509_2_0 SS2_21336509_2_0 abbreviatedTo bony endplates,BEP
AE1_21336509_2_1 SS1_21336509_2_1 SS2_21336509_2_1 abbreviatedTo cartilage endplates,CEP