PubMed:2088505
Annnotations
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 8-30 | protein | denotes | T-cell trans-activator |
| T2 | 49-80 | DNA | denotes | phorbol ester-inducible element |
| T3 | 88-110 | DNA | denotes | interleukin-2 promoter |
| T4 | 116-150 | DNA | denotes | interleukin 2 (IL-2) gene promoter |
| T5 | 176-236 | protein | denotes | cell-type-specific and ubiquitous transcriptional regulators |
| T6 | 316-320 | protein | denotes | IL-2 |
| T7 | 336-342 | cell_type | denotes | T-cell |
| T8 | 472-519 | protein | denotes | novel T-cell-specific transcriptional activator |
| T9 | 520-525 | protein | denotes | TCF-1 |
| T10 | 531-546 | protein | denotes | T-Cell Factor-1 |
| T11 | 568-600 | DNA | denotes | T-cell-specific response element |
| T12 | 602-605 | DNA | denotes | TCE |
| T13 | 626-639 | DNA | denotes | IL-2 promoter |
| T14 | 654-657 | DNA | denotes | TCE |
| T15 | 686-711 | DNA | denotes | consensus NF kappa B site |
| T16 | 744-749 | protein | denotes | TCF-1 |
| T17 | 767-777 | protein | denotes | NF kappa B |
| T18 | 793-803 | protein | denotes | NF kappa B |
| T19 | 805-810 | protein | denotes | TCF-1 |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-111 | Sentence | denotes | A novel T-cell trans-activator that recognizes a phorbol ester-inducible element of the interleukin-2 promoter. |
| S2 | 112-354 | Sentence | denotes | The interleukin 2 (IL-2) gene promoter is recognized by several cell-type-specific and ubiquitous transcriptional regulators that integrate information transmitted by various signaling systems leading to IL-2 production and T-cell activation. |
| S3 | 355-640 | Sentence | denotes | Using a combination of transfection, protein-DNA binding, and in vitro transcription methods, we have discovered the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1), which recognizes a T-cell-specific response element (TCE) located within the IL-2 promoter. |
| S4 | 641-778 | Sentence | denotes | Although the TCE is similar in sequence to a consensus NF kappa B site, several criteria indicate that TCF-1 is distinct from NF kappa B. |
| S5 | 779-877 | Sentence | denotes | However, like NF kappa B, TCF-1 activity is induced by phorbol esters and other T-cell activators. |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 0-30 | NP | denotes | A novel T-cell trans-activator |
| C2 | 31-35 | NP | denotes | that |
| C3 | 84-110 | NP | denotes | the interleukin-2 promoter |
| C4 | 112-150 | NP | denotes | The interleukin 2 (IL-2) gene promoter |
| C5 | 168-236 | NP | denotes | several cell-type-specific and ubiquitous transcriptional regulators |
| C6 | 237-241 | NP | denotes | that |
| C7 | 468-547 | NP | denotes | the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1) |
| C8 | 549-554 | NP | denotes | which |
| C9 | 566-606 | NP | denotes | a T-cell-specific response element (TCE) |
| C10 | 622-639 | NP | denotes | the IL-2 promoter |
| C11 | 650-657 | NP | denotes | the TCE |
| C12 | 744-749 | NP | denotes | TCF-1 |
| C13 | 767-777 | NP | denotes | NF kappa B |
| C14 | 793-803 | NP | denotes | NF kappa B |
| R1 | C2 | C1 | coref-relat | that,A novel T-cell trans-activator |
| R2 | C4 | C3 | coref-relat | The interleukin 2 (IL-2) gene promoter,the interleukin-2 promoter |
| R3 | C6 | C5 | coref-relat | that,several cell-type-specific and ubiquitous transcriptional regulators |
| R4 | C8 | C7 | coref-relat | which,the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1) |
| R5 | C10 | C3 | coref-ident | the IL-2 promoter,the interleukin-2 promoter |
| R6 | C11 | C9 | coref-ident | the TCE,a T-cell-specific response element (TCE) |
| R7 | C12 | C7 | coref-ident | TCF-1,the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1) |
| R8 | C14 | C13 | coref-ident | NF kappa B,NF kappa B |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 8-30 | protein_family_or_group | denotes | T-cell trans-activator |
| T2 | 49-80 | DNA_domain_or_region | denotes | phorbol ester-inducible element |
| T3 | 88-101 | protein_molecule | denotes | interleukin-2 |
| T4 | 116-129 | protein_molecule | denotes | interleukin 2 |
| T5 | 131-135 | protein_molecule | denotes | IL-2 |
| T6 | 316-320 | protein_molecule | denotes | IL-2 |
| T7 | 336-342 | cell_type | denotes | T-cell |
| T8 | 378-390 | other_name | denotes | transfection |
| T9 | 417-447 | other_name | denotes | in vitro transcription methods |
| T10 | 472-519 | protein_family_or_group | denotes | novel T-cell-specific transcriptional activator |
| T11 | 520-525 | protein_molecule | denotes | TCF-1 |
| T12 | 531-546 | protein_molecule | denotes | T-Cell Factor-1 |
| T13 | 568-600 | DNA_domain_or_region | denotes | T-cell-specific response element |
| T14 | 602-605 | DNA_domain_or_region | denotes | TCE |
| T15 | 626-630 | protein_molecule | denotes | IL-2 |
| T16 | 654-657 | DNA_domain_or_region | denotes | TCE |
| T17 | 686-695 | DNA_domain_or_region | denotes | consensus |
| T18 | 696-706 | protein_molecule | denotes | NF kappa B |
| T19 | 744-749 | protein_molecule | denotes | TCF-1 |
| T20 | 767-777 | protein_molecule | denotes | NF kappa B |
| T21 | 793-803 | protein_molecule | denotes | NF kappa B |
| T22 | 805-810 | protein_molecule | denotes | TCF-1 |
| T23 | 834-848 | other_organic_compound | denotes | phorbol esters |
| T24 | 859-876 | other_name | denotes | T-cell activators |