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PubMed:2088505 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 8-30 protein denotes T-cell trans-activator
T2 49-80 DNA denotes phorbol ester-inducible element
T3 88-110 DNA denotes interleukin-2 promoter
T4 116-150 DNA denotes interleukin 2 (IL-2) gene promoter
T5 176-236 protein denotes cell-type-specific and ubiquitous transcriptional regulators
T6 316-320 protein denotes IL-2
T7 336-342 cell_type denotes T-cell
T8 472-519 protein denotes novel T-cell-specific transcriptional activator
T9 520-525 protein denotes TCF-1
T10 531-546 protein denotes T-Cell Factor-1
T11 568-600 DNA denotes T-cell-specific response element
T12 602-605 DNA denotes TCE
T13 626-639 DNA denotes IL-2 promoter
T14 654-657 DNA denotes TCE
T15 686-711 DNA denotes consensus NF kappa B site
T16 744-749 protein denotes TCF-1
T17 767-777 protein denotes NF kappa B
T18 793-803 protein denotes NF kappa B
T19 805-810 protein denotes TCF-1

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-111 Sentence denotes A novel T-cell trans-activator that recognizes a phorbol ester-inducible element of the interleukin-2 promoter.
S2 112-354 Sentence denotes The interleukin 2 (IL-2) gene promoter is recognized by several cell-type-specific and ubiquitous transcriptional regulators that integrate information transmitted by various signaling systems leading to IL-2 production and T-cell activation.
S3 355-640 Sentence denotes Using a combination of transfection, protein-DNA binding, and in vitro transcription methods, we have discovered the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1), which recognizes a T-cell-specific response element (TCE) located within the IL-2 promoter.
S4 641-778 Sentence denotes Although the TCE is similar in sequence to a consensus NF kappa B site, several criteria indicate that TCF-1 is distinct from NF kappa B.
S5 779-877 Sentence denotes However, like NF kappa B, TCF-1 activity is induced by phorbol esters and other T-cell activators.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-30 NP denotes A novel T-cell trans-activator
C2 31-35 NP denotes that
C3 84-110 NP denotes the interleukin-2 promoter
C4 112-150 NP denotes The interleukin 2 (IL-2) gene promoter
C5 168-236 NP denotes several cell-type-specific and ubiquitous transcriptional regulators
C6 237-241 NP denotes that
C7 468-547 NP denotes the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1)
C8 549-554 NP denotes which
C9 566-606 NP denotes a T-cell-specific response element (TCE)
C10 622-639 NP denotes the IL-2 promoter
C11 650-657 NP denotes the TCE
C12 744-749 NP denotes TCF-1
C13 767-777 NP denotes NF kappa B
C14 793-803 NP denotes NF kappa B
R1 C2 C1 coref-relat that,A novel T-cell trans-activator
R2 C4 C3 coref-relat The interleukin 2 (IL-2) gene promoter,the interleukin-2 promoter
R3 C6 C5 coref-relat that,several cell-type-specific and ubiquitous transcriptional regulators
R4 C8 C7 coref-relat which,the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1)
R5 C10 C3 coref-ident the IL-2 promoter,the interleukin-2 promoter
R6 C11 C9 coref-ident the TCE,a T-cell-specific response element (TCE)
R7 C12 C7 coref-ident TCF-1,the novel T-cell-specific transcriptional activator TCF-1 (for T-Cell Factor-1)
R8 C14 C13 coref-ident NF kappa B,NF kappa B

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 8-30 protein_family_or_group denotes T-cell trans-activator
T2 49-80 DNA_domain_or_region denotes phorbol ester-inducible element
T3 88-101 protein_molecule denotes interleukin-2
T4 116-129 protein_molecule denotes interleukin 2
T5 131-135 protein_molecule denotes IL-2
T6 316-320 protein_molecule denotes IL-2
T7 336-342 cell_type denotes T-cell
T8 378-390 other_name denotes transfection
T9 417-447 other_name denotes in vitro transcription methods
T10 472-519 protein_family_or_group denotes novel T-cell-specific transcriptional activator
T11 520-525 protein_molecule denotes TCF-1
T12 531-546 protein_molecule denotes T-Cell Factor-1
T13 568-600 DNA_domain_or_region denotes T-cell-specific response element
T14 602-605 DNA_domain_or_region denotes TCE
T15 626-630 protein_molecule denotes IL-2
T16 654-657 DNA_domain_or_region denotes TCE
T17 686-695 DNA_domain_or_region denotes consensus
T18 696-706 protein_molecule denotes NF kappa B
T19 744-749 protein_molecule denotes TCF-1
T20 767-777 protein_molecule denotes NF kappa B
T21 793-803 protein_molecule denotes NF kappa B
T22 805-810 protein_molecule denotes TCF-1
T23 834-848 other_organic_compound denotes phorbol esters
T24 859-876 other_name denotes T-cell activators