PubMed:20458274 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/20458274","sourcedb":"PubMed","sourceid":"20458274","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/20458274","text":"Human 21T breast epithelial cell lines mimic breast cancer progression in vivo and in vitro and show stage-specific gene expression patterns.\nEarly breast cancer progression involves advancement through specific morphological stages including atypical ductal hyperplasia (ADH), ductal carcinoma in situ (DCIS) and invasive mammary carcinoma (IMC), although not necessarily always in a linear fashion. Observational studies have examined genetic, epigenetic and gene expression differences in breast tissues representing these stages of progression, but model systems which would allow for experimental testing of specific factors influencing transition through these stages are scarce. The 21T series cell lines, all originally derived from the same patient with metastatic breast cancer, have been proposed to represent a mammary tumor progression series. We report here that three of the 21T cell lines indeed mimic specific stages of human breast cancer progression (21PT-derived cells, ADH; 21NT-derived cells, DCIS; 21MT-1 cells, IMC) when grown in the mammary fat pad of nude mice, albeit after a year. To develop a more rapid, readily manipulatable in vitro assay for examining the biological differences between these cell lines, we have used a 3D Matrigel system. When the three cell lines were grown in 3D Matrigel, they showed characteristic morphologies, in which quantifiable aspects of stage-specific in vivo behaviors (ie, differences in acinar structure formation, cell polarization, colony morphology, cell proliferation, cell invasion) were recapitulated in a reproducible fashion. Gene expression profiling revealed a characteristic pattern for each of the three cell lines. Interestingly, Wnt pathway alterations are particularly predominant in the early transition from 21PTci (ADH) to 21NTci (DCIS), whereas alterations in expression of genes associated with control of cell motility and invasion phenomena are more prominent in the later transition of 21NTci (DCIS) to 21MT-1 (IMC). This system thus reveals potential therapeutic targets and will provide a means of testing the influences of identified genes on transitions between these stages of pre-malignant to malignant growth.","tracks":[{"project":"c_corpus","denotations":[{"id":"T1","span":{"begin":0,"end":5},"obj":"D006801"},{"id":"T2","span":{"begin":10,"end":16},"obj":"UBERON:0000310"},{"id":"T3","span":{"begin":10,"end":32},"obj":"CL:0002327"},{"id":"T5","span":{"begin":39,"end":44},"obj":"CVCL_Z366"},{"id":"T6","span":{"begin":45,"end":51},"obj":"UBERON:0000310"},{"id":"T7","span":{"begin":45,"end":58},"obj":"D001943"},{"id":"T8","span":{"begin":45,"end":58},"obj":"D001943"},{"id":"T9","span":{"begin":116,"end":120},"obj":"SO:0000704"},{"id":"T10","span":{"begin":116,"end":131},"obj":"GO:0010467"},{"id":"T11","span":{"begin":148,"end":154},"obj":"UBERON:0000310"},{"id":"T12","span":{"begin":148,"end":161},"obj":"D001943"},{"id":"T13","span":{"begin":148,"end":161},"obj":"D001943"},{"id":"T14","span":{"begin":243,"end":270},"obj":"D002285"},{"id":"T15","span":{"begin":243,"end":270},"obj":"D002285"},{"id":"T18","span":{"begin":272,"end":275},"obj":"P0A388"},{"id":"T19","span":{"begin":272,"end":275},"obj":"PR:P06525"},{"id":"T20","span":{"begin":272,"end":275},"obj":"Q8NXU1"},{"id":"T21","span":{"begin":272,"end":275},"obj":"Q6GBM4"},{"id":"T22","span":{"begin":272,"end":275},"obj":"Q47945"},{"id":"T23","span":{"begin":272,"end":275},"obj":"P0A389"},{"id":"T24","span":{"begin":272,"end":275},"obj":"Q5HRD6"},{"id":"T25","span":{"begin":272,"end":275},"obj":"P28036"},{"id":"T26","span":{"begin":272,"end":275},"obj":"P42327"},{"id":"T27","span":{"begin":272,"end":275},"obj":"PR:P00332"},{"id":"T30","span":{"begin":272,"end":275},"obj":"P81786"},{"id":"T31","span":{"begin":272,"end":275},"obj":"P18278"},{"id":"T32","span":{"begin":272,"end":275},"obj":"Q44002"},{"id":"T33","span":{"begin":272,"end":275},"obj":"Q7A742"},{"id":"T34","span":{"begin":272,"end":275},"obj":"O05542"},{"id":"T35","span":{"begin":272,"end":275},"obj":"Q2YSX0"},{"id":"T36","span":{"begin":272,"end":275},"obj":"Q6GJ63"},{"id":"T37","span":{"begin":272,"end":275},"obj":"PR:P00334"},{"id":"T39","span":{"begin":272,"end":275},"obj":"Q24857"},{"id":"T40","span":{"begin":272,"end":275},"obj":"Q8CQ56"},{"id":"T41","span":{"begin":272,"end":275},"obj":"Q2FJ31"},{"id":"T42","span":{"begin":272,"end":275},"obj":"Q2G0G1"},{"id":"T43","span":{"begin":272,"end":275},"obj":"PR:Q2G0G1"},{"id":"T45","span":{"begin":272,"end":275},"obj":"Q5HI63"},{"id":"T46","span":{"begin":272,"end":275},"obj":"Q99W07"},{"id":"T47","span":{"begin":272,"end":275},"obj":"Q04983"},{"id":"T28","span":{"begin":272,"end":275},"obj":"CHEBI:34543"},{"id":"T44","span":{"begin":272,"end":275},"obj":"CHEBI:9937"},{"id":"T29","span":{"begin":272,"end":275},"obj":"GO:0047636"},{"id":"T38","span":{"begin":272,"end":275},"obj":"GO:0004022"},{"id":"T50","span":{"begin":278,"end":302},"obj":"D002285"},{"id":"T51","span":{"begin":278,"end":302},"obj":"D002285"},{"id":"T57","span":{"begin":304,"end":308},"obj":"CVCL_5552"},{"id":"T56","span":{"begin":304,"end":308},"obj":"D002285"},{"id":"T58","span":{"begin":304,"end":308},"obj":"D002285"},{"id":"T59","span":{"begin":331,"end":340},"obj":"D002277"},{"id":"T60","span":{"begin":331,"end":340},"obj":"D002277"},{"id":"T61","span":{"begin":385,"end":391},"obj":"SO:0000987"},{"id":"T62","span":{"begin":461,"end":465},"obj":"SO:0000704"},{"id":"T63","span":{"begin":461,"end":476},"obj":"GO:0010467"},{"id":"T64","span":{"begin":492,"end":498},"obj":"UBERON:0000310"},{"id":"T65","span":{"begin":642,"end":652},"obj":"SO:1000009"},{"id":"T66","span":{"begin":774,"end":780},"obj":"UBERON:0000310"},{"id":"T67","span":{"begin":774,"end":787},"obj":"D001943"},{"id":"T68","span":{"begin":774,"end":787},"obj":"D001943"},{"id":"T69","span":{"begin":831,"end":836},"obj":"D009369"},{"id":"T70","span":{"begin":831,"end":836},"obj":"D009369"},{"id":"T71","span":{"begin":892,"end":898},"obj":"CL:0000084"},{"id":"T72","span":{"begin":912,"end":917},"obj":"CVCL_Z366"},{"id":"T73","span":{"begin":937,"end":942},"obj":"D006801"},{"id":"T74","span":{"begin":943,"end":949},"obj":"UBERON:0000310"},{"id":"T75","span":{"begin":943,"end":956},"obj":"D001943"},{"id":"T76","span":{"begin":943,"end":956},"obj":"D001943"},{"id":"T77","span":{"begin":970,"end":974},"obj":"CVCL_7934"},{"id":"T78","span":{"begin":990,"end":993},"obj":"P0A388"},{"id":"T79","span":{"begin":990,"end":993},"obj":"PR:P06525"},{"id":"T80","span":{"begin":990,"end":993},"obj":"Q8NXU1"},{"id":"T81","span":{"begin":990,"end":993},"obj":"Q6GBM4"},{"id":"T82","span":{"begin":990,"end":993},"obj":"Q47945"},{"id":"T83","span":{"begin":990,"end":993},"obj":"P0A389"},{"id":"T84","span":{"begin":990,"end":993},"obj":"Q5HRD6"},{"id":"T85","span":{"begin":990,"end":993},"obj":"P28036"},{"id":"T86","span":{"begin":990,"end":993},"obj":"P42327"},{"id":"T87","span":{"begin":990,"end":993},"obj":"PR:P00332"},{"id":"T90","span":{"begin":990,"end":993},"obj":"P81786"},{"id":"T91","span":{"begin":990,"end":993},"obj":"P18278"},{"id":"T92","span":{"begin":990,"end":993},"obj":"Q44002"},{"id":"T93","span":{"begin":990,"end":993},"obj":"Q7A742"},{"id":"T94","span":{"begin":990,"end":993},"obj":"O05542"},{"id":"T95","span":{"begin":990,"end":993},"obj":"Q2YSX0"},{"id":"T96","span":{"begin":990,"end":993},"obj":"Q6GJ63"},{"id":"T97","span":{"begin":990,"end":993},"obj":"PR:P00334"},{"id":"T99","span":{"begin":990,"end":993},"obj":"Q24857"},{"id":"T100","span":{"begin":990,"end":993},"obj":"Q8CQ56"},{"id":"T101","span":{"begin":990,"end":993},"obj":"Q2FJ31"},{"id":"T102","span":{"begin":990,"end":993},"obj":"Q2G0G1"},{"id":"T103","span":{"begin":990,"end":993},"obj":"PR:Q2G0G1"},{"id":"T105","span":{"begin":990,"end":993},"obj":"Q5HI63"},{"id":"T106","span":{"begin":990,"end":993},"obj":"Q99W07"},{"id":"T107","span":{"begin":990,"end":993},"obj":"Q04983"},{"id":"T88","span":{"begin":990,"end":993},"obj":"CHEBI:34543"},{"id":"T104","span":{"begin":990,"end":993},"obj":"CHEBI:9937"},{"id":"T89","span":{"begin":990,"end":993},"obj":"GO:0047636"},{"id":"T98","span":{"begin":990,"end":993},"obj":"GO:0004022"},{"id":"T108","span":{"begin":995,"end":999},"obj":"CVCL_7933"},{"id":"T110","span":{"begin":1015,"end":1019},"obj":"CVCL_5552"},{"id":"T109","span":{"begin":1015,"end":1019},"obj":"D002285"},{"id":"T111","span":{"begin":1015,"end":1019},"obj":"D002285"},{"id":"T112","span":{"begin":1021,"end":1027},"obj":"CVCL_7931"},{"id":"T113","span":{"begin":1023,"end":1027},"obj":"O13269"},{"id":"T114","span":{"begin":1023,"end":1027},"obj":"P43396"},{"id":"T115","span":{"begin":1023,"end":1027},"obj":"P61874"},{"id":"T116","span":{"begin":1023,"end":1027},"obj":"P81030"},{"id":"T117","span":{"begin":1023,"end":1027},"obj":"PR:Q96290"},{"id":"T118","span":{"begin":1023,"end":1027},"obj":"P02803"},{"id":"T119","span":{"begin":1023,"end":1027},"obj":"O19000"},{"id":"T121","span":{"begin":1023,"end":1027},"obj":"PR:P02802"},{"id":"T122","span":{"begin":1023,"end":1027},"obj":"P15786"},{"id":"T123","span":{"begin":1023,"end":1027},"obj":"PR:P02803"},{"id":"T124","span":{"begin":1023,"end":1027},"obj":"P02804"},{"id":"T125","span":{"begin":1023,"end":1027},"obj":"P58280"},{"id":"T126","span":{"begin":1023,"end":1027},"obj":"P15113"},{"id":"T127","span":{"begin":1023,"end":1027},"obj":"Q39511"},{"id":"T128","span":{"begin":1023,"end":1027},"obj":"P61873"},{"id":"T130","span":{"begin":1023,"end":1027},"obj":"O97388"},{"id":"T131","span":{"begin":1023,"end":1027},"obj":"P17511"},{"id":"T132","span":{"begin":1023,"end":1027},"obj":"P55942"},{"id":"T133","span":{"begin":1023,"end":1027},"obj":"P04357"},{"id":"T134","span":{"begin":1023,"end":1027},"obj":"P26571"},{"id":"T136","span":{"begin":1023,"end":1027},"obj":"P02802"},{"id":"T137","span":{"begin":1023,"end":1027},"obj":"O24528"},{"id":"T139","span":{"begin":1023,"end":1027},"obj":"P43400"},{"id":"T140","span":{"begin":1023,"end":1027},"obj":"P02805"},{"id":"T141","span":{"begin":1023,"end":1027},"obj":"Q9BT22"},{"id":"T142","span":{"begin":1023,"end":1027},"obj":"PR:000010925"},{"id":"T143","span":{"begin":1023,"end":1027},"obj":"Q39458"},{"id":"T144","span":{"begin":1023,"end":1027},"obj":"PR:000003937"},{"id":"T145","span":{"begin":1023,"end":1027},"obj":"P02797"},{"id":"T146","span":{"begin":1023,"end":1027},"obj":"P52722"},{"id":"T147","span":{"begin":1023,"end":1027},"obj":"P20238"},{"id":"T148","span":{"begin":1023,"end":1027},"obj":"P30571"},{"id":"T149","span":{"begin":1023,"end":1027},"obj":"P20830"},{"id":"T150","span":{"begin":1023,"end":1027},"obj":"O48951"},{"id":"T151","span":{"begin":1023,"end":1027},"obj":"P41927"},{"id":"T152","span":{"begin":1023,"end":1027},"obj":"P80394"},{"id":"T153","span":{"begin":1023,"end":1027},"obj":"Q8T6B3"},{"id":"T120","span":{"begin":1023,"end":1027},"obj":"GO:0047152"},{"id":"T129","span":{"begin":1023,"end":1027},"obj":"GO:0043791"},{"id":"T138","span":{"begin":1023,"end":1027},"obj":"GO:0043834"},{"id":"T154","span":{"begin":1058,"end":1073},"obj":"UBERON:0012282"},{"id":"T156","span":{"begin":1066,"end":1069},"obj":"CHEBI:24021"},{"id":"T160","span":{"begin":1070,"end":1073},"obj":"O07006"},{"id":"T161","span":{"begin":1070,"end":1073},"obj":"P33751"},{"id":"T162","span":{"begin":1070,"end":1073},"obj":"PR:000022589"},{"id":"T163","span":{"begin":1070,"end":1073},"obj":"C0H3U9"},{"id":"T164","span":{"begin":1070,"end":1073},"obj":"O06837"},{"id":"T165","span":{"begin":1070,"end":1073},"obj":"Q8X7Z8"},{"id":"T166","span":{"begin":1070,"end":1073},"obj":"Q9X697"},{"id":"T167","span":{"begin":1070,"end":1073},"obj":"Q9X698"},{"id":"T168","span":{"begin":1070,"end":1073},"obj":"Q7DBA7"},{"id":"T169","span":{"begin":1070,"end":1073},"obj":"P94404"},{"id":"T170","span":{"begin":1070,"end":1073},"obj":"Q4R101"},{"id":"T171","span":{"begin":1070,"end":1073},"obj":"Q9KPX2"},{"id":"T172","span":{"begin":1070,"end":1073},"obj":"Q9S4M7"},{"id":"T173","span":{"begin":1070,"end":1073},"obj":"P69772"},{"id":"T174","span":{"begin":1070,"end":1073},"obj":"Q4R102"},{"id":"T175","span":{"begin":1070,"end":1073},"obj":"Q9X696"},{"id":"T176","span":{"begin":1070,"end":1073},"obj":"P94405"},{"id":"T177","span":{"begin":1070,"end":1073},"obj":"P80668"},{"id":"T178","span":{"begin":1077,"end":1081},"obj":"PR:Q9CZA6"},{"id":"T179","span":{"begin":1077,"end":1081},"obj":"PR:Q9VT70"},{"id":"T180","span":{"begin":1077,"end":1081},"obj":"Q9CZA6"},{"id":"T181","span":{"begin":1077,"end":1081},"obj":"PR:000023423"},{"id":"T182","span":{"begin":1077,"end":1081},"obj":"PR:P45799"},{"id":"T183","span":{"begin":1077,"end":1081},"obj":"PR:000011051"},{"id":"T184","span":{"begin":1077,"end":1081},"obj":"PR:Q9NXR1"},{"id":"T185","span":{"begin":1077,"end":1081},"obj":"Q9ES39"},{"id":"T186","span":{"begin":1077,"end":1081},"obj":"Q9NXR1"},{"id":"T187","span":{"begin":1077,"end":1081},"obj":"PR:Q9ES39"},{"id":"T188","span":{"begin":1077,"end":1086},"obj":"10090"},{"id":"T189","span":{"begin":1077,"end":1086},"obj":"D008819"},{"id":"T190","span":{"begin":1082,"end":1086},"obj":"PR:000005054"},{"id":"T192","span":{"begin":1082,"end":1086},"obj":"O89094"},{"id":"T195","span":{"begin":1256,"end":1264},"obj":"C059485"},{"id":"T197","span":{"begin":1316,"end":1324},"obj":"C059485"},{"id":"T198","span":{"begin":1470,"end":1479},"obj":"GO:0009058"},{"id":"T199","span":{"begin":1481,"end":1498},"obj":"GO:0030010"},{"id":"T200","span":{"begin":1500,"end":1517},"obj":"GO:0007149"},{"id":"T201","span":{"begin":1500,"end":1517},"obj":"GO:0001403"},{"id":"T202","span":{"begin":1519,"end":1537},"obj":"GO:0008283"},{"id":"T203","span":{"begin":1524,"end":1537},"obj":"UBERON:2000098"},{"id":"T204","span":{"begin":1600,"end":1615},"obj":"GO:0010467"},{"id":"T205","span":{"begin":1713,"end":1720},"obj":"CHEBI:34922"},{"id":"T206","span":{"begin":1775,"end":1785},"obj":"SO:1000009"},{"id":"T207","span":{"begin":1799,"end":1802},"obj":"P0A388"},{"id":"T208","span":{"begin":1799,"end":1802},"obj":"PR:P06525"},{"id":"T209","span":{"begin":1799,"end":1802},"obj":"Q8NXU1"},{"id":"T210","span":{"begin":1799,"end":1802},"obj":"Q6GBM4"},{"id":"T211","span":{"begin":1799,"end":1802},"obj":"Q47945"},{"id":"T212","span":{"begin":1799,"end":1802},"obj":"P0A389"},{"id":"T213","span":{"begin":1799,"end":1802},"obj":"Q5HRD6"},{"id":"T214","span":{"begin":1799,"end":1802},"obj":"P28036"},{"id":"T215","span":{"begin":1799,"end":1802},"obj":"P42327"},{"id":"T216","span":{"begin":1799,"end":1802},"obj":"PR:P00332"},{"id":"T219","span":{"begin":1799,"end":1802},"obj":"P81786"},{"id":"T220","span":{"begin":1799,"end":1802},"obj":"P18278"},{"id":"T221","span":{"begin":1799,"end":1802},"obj":"Q44002"},{"id":"T222","span":{"begin":1799,"end":1802},"obj":"Q7A742"},{"id":"T223","span":{"begin":1799,"end":1802},"obj":"O05542"},{"id":"T224","span":{"begin":1799,"end":1802},"obj":"Q2YSX0"},{"id":"T225","span":{"begin":1799,"end":1802},"obj":"Q6GJ63"},{"id":"T226","span":{"begin":1799,"end":1802},"obj":"PR:P00334"},{"id":"T228","span":{"begin":1799,"end":1802},"obj":"Q24857"},{"id":"T229","span":{"begin":1799,"end":1802},"obj":"Q8CQ56"},{"id":"T230","span":{"begin":1799,"end":1802},"obj":"Q2FJ31"},{"id":"T231","span":{"begin":1799,"end":1802},"obj":"Q2G0G1"},{"id":"T232","span":{"begin":1799,"end":1802},"obj":"PR:Q2G0G1"},{"id":"T234","span":{"begin":1799,"end":1802},"obj":"Q5HI63"},{"id":"T235","span":{"begin":1799,"end":1802},"obj":"Q99W07"},{"id":"T236","span":{"begin":1799,"end":1802},"obj":"Q04983"},{"id":"T217","span":{"begin":1799,"end":1802},"obj":"CHEBI:34543"},{"id":"T233","span":{"begin":1799,"end":1802},"obj":"CHEBI:9937"},{"id":"T218","span":{"begin":1799,"end":1802},"obj":"GO:0047636"},{"id":"T227","span":{"begin":1799,"end":1802},"obj":"GO:0004022"},{"id":"T238","span":{"begin":1815,"end":1819},"obj":"CVCL_5552"},{"id":"T237","span":{"begin":1815,"end":1819},"obj":"D002285"},{"id":"T239","span":{"begin":1815,"end":1819},"obj":"D002285"},{"id":"T240","span":{"begin":1892,"end":1905},"obj":"GO:0048870"},{"id":"T241","span":{"begin":1961,"end":1971},"obj":"SO:1000009"},{"id":"T243","span":{"begin":1983,"end":1987},"obj":"CVCL_5552"},{"id":"T242","span":{"begin":1983,"end":1987},"obj":"D002285"},{"id":"T244","span":{"begin":1983,"end":1987},"obj":"D002285"},{"id":"T245","span":{"begin":1992,"end":1998},"obj":"CVCL_7931"},{"id":"T246","span":{"begin":1994,"end":1998},"obj":"O13269"},{"id":"T247","span":{"begin":1994,"end":1998},"obj":"P43396"},{"id":"T248","span":{"begin":1994,"end":1998},"obj":"P61874"},{"id":"T249","span":{"begin":1994,"end":1998},"obj":"P81030"},{"id":"T250","span":{"begin":1994,"end":1998},"obj":"PR:Q96290"},{"id":"T251","span":{"begin":1994,"end":1998},"obj":"P02803"},{"id":"T252","span":{"begin":1994,"end":1998},"obj":"O19000"},{"id":"T254","span":{"begin":1994,"end":1998},"obj":"PR:P02802"},{"id":"T255","span":{"begin":1994,"end":1998},"obj":"P15786"},{"id":"T256","span":{"begin":1994,"end":1998},"obj":"PR:P02803"},{"id":"T257","span":{"begin":1994,"end":1998},"obj":"P02804"},{"id":"T258","span":{"begin":1994,"end":1998},"obj":"P58280"},{"id":"T259","span":{"begin":1994,"end":1998},"obj":"P15113"},{"id":"T260","span":{"begin":1994,"end":1998},"obj":"Q39511"},{"id":"T261","span":{"begin":1994,"end":1998},"obj":"P61873"},{"id":"T263","span":{"begin":1994,"end":1998},"obj":"O97388"},{"id":"T264","span":{"begin":1994,"end":1998},"obj":"P17511"},{"id":"T265","span":{"begin":1994,"end":1998},"obj":"P55942"},{"id":"T266","span":{"begin":1994,"end":1998},"obj":"P04357"},{"id":"T267","span":{"begin":1994,"end":1998},"obj":"P26571"},{"id":"T269","span":{"begin":1994,"end":1998},"obj":"P02802"},{"id":"T270","span":{"begin":1994,"end":1998},"obj":"O24528"},{"id":"T272","span":{"begin":1994,"end":1998},"obj":"P43400"},{"id":"T273","span":{"begin":1994,"end":1998},"obj":"P02805"},{"id":"T274","span":{"begin":1994,"end":1998},"obj":"Q9BT22"},{"id":"T275","span":{"begin":1994,"end":1998},"obj":"PR:000010925"},{"id":"T276","span":{"begin":1994,"end":1998},"obj":"Q39458"},{"id":"T277","span":{"begin":1994,"end":1998},"obj":"PR:000003937"},{"id":"T278","span":{"begin":1994,"end":1998},"obj":"P02797"},{"id":"T279","span":{"begin":1994,"end":1998},"obj":"P52722"},{"id":"T280","span":{"begin":1994,"end":1998},"obj":"P20238"},{"id":"T281","span":{"begin":1994,"end":1998},"obj":"P30571"},{"id":"T282","span":{"begin":1994,"end":1998},"obj":"P20830"},{"id":"T283","span":{"begin":1994,"end":1998},"obj":"O48951"},{"id":"T284","span":{"begin":1994,"end":1998},"obj":"P41927"},{"id":"T285","span":{"begin":1994,"end":1998},"obj":"P80394"},{"id":"T286","span":{"begin":1994,"end":1998},"obj":"Q8T6B3"},{"id":"T253","span":{"begin":1994,"end":1998},"obj":"GO:0047152"},{"id":"T262","span":{"begin":1994,"end":1998},"obj":"GO:0043791"},{"id":"T271","span":{"begin":1994,"end":1998},"obj":"GO:0043834"},{"id":"T288","span":{"begin":2171,"end":2174},"obj":"PR:Q8LLD0"},{"id":"T290","span":{"begin":2171,"end":2174},"obj":"UBERON:0001782"},{"id":"T289","span":{"begin":2171,"end":2174},"obj":"SO:0002045"},{"id":"T287","span":{"begin":2171,"end":2174},"obj":"GO:0003904"}],"attributes":[{"subj":"T1","pred":"source","obj":"c_corpus"},{"subj":"T2","pred":"source","obj":"c_corpus"},{"subj":"T3","pred":"source","obj":"c_corpus"},{"subj":"T5","pred":"source","obj":"c_corpus"},{"subj":"T6","pred":"source","obj":"c_corpus"},{"subj":"T7","pred":"source","obj":"c_corpus"},{"subj":"T8","pred":"source","obj":"c_corpus"},{"subj":"T9","pred":"source","obj":"c_corpus"},{"subj":"T10","pred":"source","obj":"c_corpus"},{"subj":"T11","pred":"source","obj":"c_corpus"},{"subj":"T12","pred":"source","obj":"c_corpus"},{"subj":"T13","pred":"source","obj":"c_corpus"},{"subj":"T14","pred":"source","obj":"c_corpus"},{"subj":"T15","pred":"source","obj":"c_corpus"},{"subj":"T18","pred":"source","obj":"c_corpus"},{"subj":"T19","pred":"source","obj":"c_corpus"},{"subj":"T20","pred":"source","obj":"c_corpus"},{"subj":"T21","pred":"source","obj":"c_corpus"},{"subj":"T22","pred":"source","obj":"c_corpus"},{"subj":"T23","pred":"source","obj":"c_corpus"},{"subj":"T24","pred":"source","obj":"c_corpus"},{"subj":"T25","pred":"source","obj":"c_corpus"},{"subj":"T26","pred":"source","obj":"c_corpus"},{"subj":"T27","pred":"source","obj":"c_corpus"},{"subj":"T30","pred":"source","obj":"c_corpus"},{"subj":"T31","pred":"source","obj":"c_corpus"},{"subj":"T32","pred":"source","obj":"c_corpus"},{"subj":"T33","pred":"source","obj":"c_corpus"},{"subj":"T34","pred":"source","obj":"c_corpus"},{"subj":"T35","pred":"source","obj":"c_corpus"},{"subj":"T36","pred":"source","obj":"c_corpus"},{"subj":"T37","pred":"source","obj":"c_corpus"},{"subj":"T39","pred":"source","obj":"c_corpus"},{"subj":"T40","pred":"source","obj":"c_corpus"},{"subj":"T41","pred":"source","obj":"c_corpus"},{"subj":"T42","pred":"source","obj":"c_corpus"},{"subj":"T43","pred":"source","obj":"c_corpus"},{"subj":"T45","pred":"source","obj":"c_corpus"},{"subj":"T46","pred":"source","obj":"c_corpus"},{"subj":"T47","pred":"source","obj":"c_corpus"},{"subj":"T28","pred":"source","obj":"c_corpus"},{"subj":"T44","pred":"source","obj":"c_corpus"},{"subj":"T29","pred":"source","obj":"c_corpus"},{"subj":"T38","pred":"source","obj":"c_corpus"},{"subj":"T50","pred":"source","obj":"c_corpus"},{"subj":"T51","pred":"source","obj":"c_corpus"},{"subj":"T57","pred":"source","obj":"c_corpus"},{"subj":"T56","pred":"source","obj":"c_corpus"},{"subj":"T58","pred":"source","obj":"c_corpus"},{"subj":"T59","pred":"source","obj":"c_corpus"},{"subj":"T60","pred":"source","obj":"c_corpus"},{"subj":"T61","pred":"source","obj":"c_corpus"},{"subj":"T62","pred":"source","obj":"c_corpus"},{"subj":"T63","pred":"source","obj":"c_corpus"},{"subj":"T64","pred":"source","obj":"c_corpus"},{"subj":"T65","pred":"source","obj":"c_corpus"},{"subj":"T66","pred":"source","obj":"c_corpus"},{"subj":"T67","pred":"source","obj":"c_corpus"},{"subj":"T68","pred":"source","obj":"c_corpus"},{"subj":"T69","pred":"source","obj":"c_corpus"},{"subj":"T70","pred":"source","obj":"c_corpus"},{"subj":"T71","pred":"source","obj":"c_corpus"},{"subj":"T72","pred":"source","obj":"c_corpus"},{"subj":"T73","pred":"source","obj":"c_corpus"},{"subj":"T74","pred":"source","obj":"c_corpus"},{"subj":"T75","pred":"source","obj":"c_corpus"},{"subj":"T76","pred":"source","obj":"c_corpus"},{"subj":"T77","pred":"source","obj":"c_corpus"},{"subj":"T78","pred":"source","obj":"c_corpus"},{"subj":"T79","pred":"source","obj":"c_corpus"},{"subj":"T80","pred":"source","obj":"c_corpus"},{"subj":"T81","pred":"source","obj":"c_corpus"},{"subj":"T82","pred":"source","obj":"c_corpus"},{"subj":"T83","pred":"source","obj":"c_corpus"},{"subj":"T84","pred":"source","obj":"c_corpus"},{"subj":"T85","pred":"source","obj":"c_corpus"},{"subj":"T86","pred":"source","obj":"c_corpus"},{"subj":"T87","pred":"source","obj":"c_corpus"},{"subj":"T90","pred":"source","obj":"c_corpus"},{"subj":"T91","pred":"source","obj":"c_corpus"},{"subj":"T92","pred":"source","obj":"c_corpus"},{"subj":"T93","pred":"source","obj":"c_corpus"},{"subj":"T94","pred":"source","obj":"c_corpus"},{"subj":"T95","pred":"source","obj":"c_corpus"},{"subj":"T96","pred":"source","obj":"c_corpus"},{"subj":"T97","pred":"source","obj":"c_corpus"},{"subj":"T99","pred":"source","obj":"c_corpus"},{"subj":"T100","pred":"source","obj":"c_corpus"},{"subj":"T101","pred":"source","obj":"c_corpus"},{"subj":"T102","pred":"source","obj":"c_corpus"},{"subj":"T103","pred":"source","obj":"c_corpus"},{"subj":"T105","pred":"source","obj":"c_corpus"},{"subj":"T106","pred":"source","obj":"c_corpus"},{"subj":"T107","pred":"source","obj":"c_corpus"},{"subj":"T88","pred":"source","obj":"c_corpus"},{"subj":"T104","pred":"source","obj":"c_corpus"},{"subj":"T89","pred":"source","obj":"c_corpus"},{"subj":"T98","pred":"source","obj":"c_corpus"},{"subj":"T108","pred":"source","obj":"c_corpus"},{"subj":"T110","pred":"source","obj":"c_corpus"},{"subj":"T109","pred":"source","obj":"c_corpus"},{"subj":"T111","pred":"source","obj":"c_corpus"},{"subj":"T112","pred":"source","obj":"c_corpus"},{"subj":"T113","pred":"source","obj":"c_corpus"},{"subj":"T114","pred":"source","obj":"c_corpus"},{"subj":"T115","pred":"source","obj":"c_corpus"},{"subj":"T116","pred":"source","obj":"c_corpus"},{"subj":"T117","pred":"source","obj":"c_corpus"},{"subj":"T118","pred":"source","obj":"c_corpus"},{"subj":"T119","pred":"source","obj":"c_corpus"},{"subj":"T121","pred":"source","obj":"c_corpus"},{"subj":"T122","pred":"source","obj":"c_corpus"},{"subj":"T123","pred":"source","obj":"c_corpus"},{"subj":"T124","pred":"source","obj":"c_corpus"},{"subj":"T125","pred":"source","obj":"c_corpus"},{"subj":"T126","pred":"source","obj":"c_corpus"},{"subj":"T127","pred":"source","obj":"c_corpus"},{"subj":"T128","pred":"source","obj":"c_corpus"},{"subj":"T130","pred":"source","obj":"c_corpus"},{"subj":"T131","pred":"source","obj":"c_corpus"},{"subj":"T132","pred":"source","obj":"c_corpus"},{"subj":"T133","pred":"source","obj":"c_corpus"},{"subj":"T134","pred":"source","obj":"c_corpus"},{"subj":"T136","pred":"source","obj":"c_corpus"},{"subj":"T137","pred":"source","obj":"c_corpus"},{"subj":"T139","pred":"source","obj":"c_corpus"},{"subj":"T140","pred":"source","obj":"c_corpus"},{"subj":"T141","pred":"source","obj":"c_corpus"},{"subj":"T142","pred":"source","obj":"c_corpus"},{"subj":"T143","pred":"source","obj":"c_corpus"},{"subj":"T144","pred":"source","obj":"c_corpus"},{"subj":"T145","pred":"source","obj":"c_corpus"},{"subj":"T146","pred":"source","obj":"c_corpus"},{"subj":"T147","pred":"source","obj":"c_corpus"},{"subj":"T148","pred":"source","obj":"c_corpus"},{"subj":"T149","pred":"source","obj":"c_corpus"},{"subj":"T150","pred":"source","obj":"c_corpus"},{"subj":"T151","pred":"source","obj":"c_corpus"},{"subj":"T152","pred":"source","obj":"c_corpus"},{"subj":"T153","pred":"source","obj":"c_corpus"},{"subj":"T120","pred":"source","obj":"c_corpus"},{"subj":"T129","pred":"source","obj":"c_corpus"},{"subj":"T138","pred":"source","obj":"c_corpus"},{"subj":"T154","pred":"source","obj":"c_corpus"},{"subj":"T156","pred":"source","obj":"c_corpus"},{"subj":"T160","pred":"source","obj":"c_corpus"},{"subj":"T161","pred":"source","obj":"c_corpus"},{"subj":"T162","pred":"source","obj":"c_corpus"},{"subj":"T163","pred":"source","obj":"c_corpus"},{"subj":"T164","pred":"source","obj":"c_corpus"},{"subj":"T165","pred":"source","obj":"c_corpus"},{"subj":"T166","pred":"source","obj":"c_corpus"},{"subj":"T167","pred":"source","obj":"c_corpus"},{"subj":"T168","pred":"source","obj":"c_corpus"},{"subj":"T169","pred":"source","obj":"c_corpus"},{"subj":"T170","pred":"source","obj":"c_corpus"},{"subj":"T171","pred":"source","obj":"c_corpus"},{"subj":"T172","pred":"source","obj":"c_corpus"},{"subj":"T173","pred":"source","obj":"c_corpus"},{"subj":"T174","pred":"source","obj":"c_corpus"},{"subj":"T175","pred":"source","obj":"c_corpus"},{"subj":"T176","pred":"source","obj":"c_corpus"},{"subj":"T177","pred":"source","obj":"c_corpus"},{"subj":"T178","pred":"source","obj":"c_corpus"},{"subj":"T179","pred":"source","obj":"c_corpus"},{"subj":"T180","pred":"source","obj":"c_corpus"},{"subj":"T181","pred":"source","obj":"c_corpus"},{"subj":"T182","pred":"source","obj":"c_corpus"},{"subj":"T183","pred":"source","obj":"c_corpus"},{"subj":"T184","pred":"source","obj":"c_corpus"},{"subj":"T185","pred":"source","obj":"c_corpus"},{"subj":"T186","pred":"source","obj":"c_corpus"},{"subj":"T187","pred":"source","obj":"c_corpus"},{"subj":"T188","pred":"source","obj":"c_corpus"},{"subj":"T189","pred":"source","obj":"c_corpus"},{"subj":"T190","pred":"source","obj":"c_corpus"},{"subj":"T192","pred":"source","obj":"c_corpus"},{"subj":"T195","pred":"source","obj":"c_corpus"},{"subj":"T197","pred":"source","obj":"c_corpus"},{"subj":"T198","pred":"source","obj":"c_corpus"},{"subj":"T199","pred":"source","obj":"c_corpus"},{"subj":"T200","pred":"source","obj":"c_corpus"},{"subj":"T201","pred":"source","obj":"c_corpus"},{"subj":"T202","pred":"source","obj":"c_corpus"},{"subj":"T203","pred":"source","obj":"c_corpus"},{"subj":"T204","pred":"source","obj":"c_corpus"},{"subj":"T205","pred":"source","obj":"c_corpus"},{"subj":"T206","pred":"source","obj":"c_corpus"},{"subj":"T207","pred":"source","obj":"c_corpus"},{"subj":"T208","pred":"source","obj":"c_corpus"},{"subj":"T209","pred":"source","obj":"c_corpus"},{"subj":"T210","pred":"source","obj":"c_corpus"},{"subj":"T211","pred":"source","obj":"c_corpus"},{"subj":"T212","pred":"source","obj":"c_corpus"},{"subj":"T213","pred":"source","obj":"c_corpus"},{"subj":"T214","pred":"source","obj":"c_corpus"},{"subj":"T215","pred":"source","obj":"c_corpus"},{"subj":"T216","pred":"source","obj":"c_corpus"},{"subj":"T219","pred":"source","obj":"c_corpus"},{"subj":"T220","pred":"source","obj":"c_corpus"},{"subj":"T221","pred":"source","obj":"c_corpus"},{"subj":"T222","pred":"source","obj":"c_corpus"},{"subj":"T223","pred":"source","obj":"c_corpus"},{"subj":"T224","pred":"source","obj":"c_corpus"},{"subj":"T225","pred":"source","obj":"c_corpus"},{"subj":"T226","pred":"source","obj":"c_corpus"},{"subj":"T228","pred":"source","obj":"c_corpus"},{"subj":"T229","pred":"source","obj":"c_corpus"},{"subj":"T230","pred":"source","obj":"c_corpus"},{"subj":"T231","pred":"source","obj":"c_corpus"},{"subj":"T232","pred":"source","obj":"c_corpus"},{"subj":"T234","pred":"source","obj":"c_corpus"},{"subj":"T235","pred":"source","obj":"c_corpus"},{"subj":"T236","pred":"source","obj":"c_corpus"},{"subj":"T217","pred":"source","obj":"c_corpus"},{"subj":"T233","pred":"source","obj":"c_corpus"},{"subj":"T218","pred":"source","obj":"c_corpus"},{"subj":"T227","pred":"source","obj":"c_corpus"},{"subj":"T238","pred":"source","obj":"c_corpus"},{"subj":"T237","pred":"source","obj":"c_corpus"},{"subj":"T239","pred":"source","obj":"c_corpus"},{"subj":"T240","pred":"source","obj":"c_corpus"},{"subj":"T241","pred":"source","obj":"c_corpus"},{"subj":"T243","pred":"source","obj":"c_corpus"},{"subj":"T242","pred":"source","obj":"c_corpus"},{"subj":"T244","pred":"source","obj":"c_corpus"},{"subj":"T245","pred":"source","obj":"c_corpus"},{"subj":"T246","pred":"source","obj":"c_corpus"},{"subj":"T247","pred":"source","obj":"c_corpus"},{"subj":"T248","pred":"source","obj":"c_corpus"},{"subj":"T249","pred":"source","obj":"c_corpus"},{"subj":"T250","pred":"source","obj":"c_corpus"},{"subj":"T251","pred":"source","obj":"c_corpus"},{"subj":"T252","pred":"source","obj":"c_corpus"},{"subj":"T254","pred":"source","obj":"c_corpus"},{"subj":"T255","pred":"source","obj":"c_corpus"},{"subj":"T256","pred":"source","obj":"c_corpus"},{"subj":"T257","pred":"source","obj":"c_corpus"},{"subj":"T258","pred":"source","obj":"c_corpus"},{"subj":"T259","pred":"source","obj":"c_corpus"},{"subj":"T260","pred":"source","obj":"c_corpus"},{"subj":"T261","pred":"source","obj":"c_corpus"},{"subj":"T263","pred":"source","obj":"c_corpus"},{"subj":"T264","pred":"source","obj":"c_corpus"},{"subj":"T265","pred":"source","obj":"c_corpus"},{"subj":"T266","pred":"source","obj":"c_corpus"},{"subj":"T267","pred":"source","obj":"c_corpus"},{"subj":"T269","pred":"source","obj":"c_corpus"},{"subj":"T270","pred":"source","obj":"c_corpus"},{"subj":"T272","pred":"source","obj":"c_corpus"},{"subj":"T273","pred":"source","obj":"c_corpus"},{"subj":"T274","pred":"source","obj":"c_corpus"},{"subj":"T275","pred":"source","obj":"c_corpus"},{"subj":"T276","pred":"source","obj":"c_corpus"},{"subj":"T277","pred":"source","obj":"c_corpus"},{"subj":"T278","pred":"source","obj":"c_corpus"},{"subj":"T279","pred":"source","obj":"c_corpus"},{"subj":"T280","pred":"source","obj":"c_corpus"},{"subj":"T281","pred":"source","obj":"c_corpus"},{"subj":"T282","pred":"source","obj":"c_corpus"},{"subj":"T283","pred":"source","obj":"c_corpus"},{"subj":"T284","pred":"source","obj":"c_corpus"},{"subj":"T285","pred":"source","obj":"c_corpus"},{"subj":"T286","pred":"source","obj":"c_corpus"},{"subj":"T253","pred":"source","obj":"c_corpus"},{"subj":"T262","pred":"source","obj":"c_corpus"},{"subj":"T271","pred":"source","obj":"c_corpus"},{"subj":"T288","pred":"source","obj":"c_corpus"},{"subj":"T290","pred":"source","obj":"c_corpus"},{"subj":"T289","pred":"source","obj":"c_corpus"},{"subj":"T287","pred":"source","obj":"c_corpus"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":148,"end":161},"obj":"HP_0003002"},{"id":"T2","span":{"begin":148,"end":161},"obj":"HP_0100013"},{"id":"T3","span":{"begin":155,"end":161},"obj":"HP_0002664"},{"id":"T4","span":{"begin":774,"end":787},"obj":"HP_0003002"},{"id":"T5","span":{"begin":774,"end":787},"obj":"HP_0100013"},{"id":"T6","span":{"begin":781,"end":787},"obj":"HP_0002664"},{"id":"T7","span":{"begin":831,"end":836},"obj":"HP_0002664"},{"id":"T8","span":{"begin":943,"end":956},"obj":"HP_0003002"},{"id":"T9","span":{"begin":943,"end":956},"obj":"HP_0100013"},{"id":"T10","span":{"begin":950,"end":956},"obj":"HP_0002664"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"},{"subj":"T4","pred":"source","obj":"PubmedHPO"},{"subj":"T5","pred":"source","obj":"PubmedHPO"},{"subj":"T6","pred":"source","obj":"PubmedHPO"},{"subj":"T7","pred":"source","obj":"PubmedHPO"},{"subj":"T8","pred":"source","obj":"PubmedHPO"},{"subj":"T9","pred":"source","obj":"PubmedHPO"},{"subj":"T10","pred":"source","obj":"PubmedHPO"}]},{"project":"Allie","denotations":[{"id":"SS1_20458274_1_0","span":{"begin":243,"end":270},"obj":"expanded"},{"id":"SS2_20458274_1_0","span":{"begin":272,"end":275},"obj":"abbr"},{"id":"SS1_20458274_1_1","span":{"begin":278,"end":302},"obj":"expanded"},{"id":"SS2_20458274_1_1","span":{"begin":304,"end":308},"obj":"abbr"},{"id":"SS1_20458274_1_2","span":{"begin":314,"end":340},"obj":"expanded"},{"id":"SS2_20458274_1_2","span":{"begin":342,"end":345},"obj":"abbr"}],"relations":[{"id":"AE1_20458274_1_0","pred":"abbreviatedTo","subj":"SS1_20458274_1_0","obj":"SS2_20458274_1_0"},{"id":"AE1_20458274_1_1","pred":"abbreviatedTo","subj":"SS1_20458274_1_1","obj":"SS2_20458274_1_1"},{"id":"AE1_20458274_1_2","pred":"abbreviatedTo","subj":"SS1_20458274_1_2","obj":"SS2_20458274_1_2"}],"attributes":[{"subj":"SS1_20458274_1_0","pred":"source","obj":"Allie"},{"subj":"SS2_20458274_1_0","pred":"source","obj":"Allie"},{"subj":"SS1_20458274_1_1","pred":"source","obj":"Allie"},{"subj":"SS2_20458274_1_1","pred":"source","obj":"Allie"},{"subj":"SS1_20458274_1_2","pred":"source","obj":"Allie"},{"subj":"SS2_20458274_1_2","pred":"source","obj":"Allie"}]},{"project":"PubMed_ArguminSci","denotations":[{"id":"T1","span":{"begin":142,"end":400},"obj":"DRI_Background"},{"id":"T2","span":{"begin":401,"end":685},"obj":"DRI_Background"},{"id":"T3","span":{"begin":686,"end":856},"obj":"DRI_Approach"},{"id":"T4","span":{"begin":857,"end":1108},"obj":"DRI_Outcome"},{"id":"T5","span":{"begin":1109,"end":1272},"obj":"DRI_Background"},{"id":"T6","span":{"begin":1273,"end":1599},"obj":"DRI_Background"},{"id":"T7","span":{"begin":1600,"end":1693},"obj":"DRI_Approach"},{"id":"T8","span":{"begin":1694,"end":2005},"obj":"DRI_Background"},{"id":"T9","span":{"begin":2006,"end":2205},"obj":"DRI_Challenge"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T2","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T3","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T4","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T5","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T6","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T7","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T8","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T9","pred":"source","obj":"PubMed_ArguminSci"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"c_corpus","color":"#ad93ec","default":true},{"id":"PubmedHPO","color":"#93ec93"},{"id":"Allie","color":"#ec93ac"},{"id":"PubMed_ArguminSci","color":"#93c6ec"}]}]}}