PMC:7574920 / 32602-33059
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T126 | 217-220 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T77 | 85-93 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T78 | 96-105 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T280 | 144-145 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T281 | 310-311 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T282 | 411-412 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T283 | 424-431 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T67 | 217-220 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 232 | 308-309 | Gene | denotes | N | Gene:43740575 |
| 233 | 85-105 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T196 | 50-52 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T197 | 217-234 | http://purl.obolibrary.org/obo/GO_0006277 | denotes | DNA amplification |
| T198 | 284-286 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T199 | 358-360 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T250 | 0-106 | Sentence | denotes | Here, we evaluated the use and suitability of the RT-LAMP assay for the detection of SARS-CoV-2 infection. |
| T251 | 107-245 | Sentence | denotes | We also developed LAMP-sequencing as a fully scalable alternative to colorimetric or fluorometric analysis of DNA amplification reactions. |
| T252 | 246-457 | Sentence | denotes | Our results indicate that whereas the RT-LAMP assay using the N-A primer set is not sensitive enough to replace RT-qPCR in all applications, it does hold promise as a method for testing large numbers of samples. |