PMC:7574920 / 15171-15868
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T75 | 71-84 | Body_part | denotes | RNA molecules | http://purl.org/sig/ont/fma/fma84126 |
| T76 | 71-74 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T77 | 315-318 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T78 | 474-487 | Body_part | denotes | RNA molecules | http://purl.org/sig/ont/fma/fma84126 |
| T79 | 474-477 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T80 | 634-637 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T81 | 641-644 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T149 | 40-41 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T150 | 260-261 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T151 | 378-379 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T152 | 555-556 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T50 | 75-84 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
| T51 | 478-487 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 173 | 553-554 | Gene | denotes | N | Gene:43740575 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T80 | 4-6 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T81 | 220-222 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T82 | 332-334 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T83 | 363-365 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T84 | 496-498 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T85 | 581-583 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T97 | 0-195 | Sentence | denotes | The RT-qPCR kit used was calibrated and a CT ≈ 30 corresponded to 1000 RNA molecules present in the reaction according to the certificate provided by the manufacturer (see Materials and Methods). |
| T98 | 196-279 | Sentence | denotes | The performance of each RT-qPCR run was validated using this as a positive control. |
| T99 | 280-520 | Sentence | denotes | Considering that 10 μl of isolated RNA was used for RT-qPCR, but only 1 μl for the RT-LAMP assay, a cutoff of CT ≈ 30 agreed well with the observed experimental sensitivity of approximately 100 RNA molecules for the RT-LAMP assay (Fig. 1A). |
| T100 | 521-697 | Sentence | denotes | Therefore, it appeared that the N-A primer set used for the RT-LAMP assay performed equally well with either IVT RNA or RNA samples isolated from the pharyngeal swab specimens. |