PMC:7558333 / 5055-5756 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T11","span":{"begin":160,"end":166},"obj":"Body_part"},{"id":"T12","span":{"begin":177,"end":181},"obj":"Body_part"},{"id":"T13","span":{"begin":396,"end":401},"obj":"Body_part"},{"id":"T14","span":{"begin":412,"end":417},"obj":"Body_part"},{"id":"T15","span":{"begin":437,"end":442},"obj":"Body_part"},{"id":"T16","span":{"begin":570,"end":575},"obj":"Body_part"}],"attributes":[{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma256135"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma63083"},{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma67498"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T8","span":{"begin":160,"end":166},"obj":"Body_part"},{"id":"T9","span":{"begin":396,"end":401},"obj":"Body_part"},{"id":"T10","span":{"begin":412,"end":417},"obj":"Body_part"},{"id":"T11","span":{"begin":437,"end":442},"obj":"Body_part"},{"id":"T12","span":{"begin":570,"end":575},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T38","span":{"begin":89,"end":97},"obj":"Disease"},{"id":"T39","span":{"begin":99,"end":135},"obj":"Disease"},{"id":"T40","span":{"begin":99,"end":111},"obj":"Disease"},{"id":"T41","span":{"begin":113,"end":135},"obj":"Disease"},{"id":"T42","span":{"begin":137,"end":154},"obj":"Disease"},{"id":"T43","span":{"begin":160,"end":174},"obj":"Disease"}],"attributes":[{"id":"A38","pred":"mondo_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/MONDO_0005015"},{"id":"A39","pred":"mondo_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/MONDO_0001302"},{"id":"A40","pred":"mondo_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/MONDO_0005044"},{"id":"A41","pred":"mondo_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/MONDO_0004995"},{"id":"A42","pred":"mondo_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/MONDO_0005275"},{"id":"A43","pred":"mondo_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/MONDO_0001343"},{"id":"A44","pred":"mondo_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/MONDO_0005240"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T31","span":{"begin":160,"end":166},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T32","span":{"begin":160,"end":166},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T33","span":{"begin":160,"end":166},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T34","span":{"begin":385,"end":386},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T35","span":{"begin":396,"end":401},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T36","span":{"begin":396,"end":401},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T37","span":{"begin":430,"end":435},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T38","span":{"begin":437,"end":442},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T39","span":{"begin":570,"end":575},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T2","span":{"begin":99,"end":111},"obj":"Phenotype"},{"id":"T3","span":{"begin":113,"end":135},"obj":"Phenotype"},{"id":"T4","span":{"begin":160,"end":174},"obj":"Phenotype"},{"id":"T5","span":{"begin":555,"end":561},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0000822"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0001626"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0000112"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0100806"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"LitCovid-sentences","denotations":[{"id":"T41","span":{"begin":0,"end":340},"obj":"Sentence"},{"id":"T42","span":{"begin":341,"end":436},"obj":"Sentence"},{"id":"T43","span":{"begin":437,"end":498},"obj":"Sentence"},{"id":"T44","span":{"begin":499,"end":701},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"LitCovid-PubTator","denotations":[{"id":"134","span":{"begin":39,"end":46},"obj":"Species"},{"id":"135","span":{"begin":89,"end":97},"obj":"Disease"},{"id":"136","span":{"begin":99,"end":111},"obj":"Disease"},{"id":"137","span":{"begin":113,"end":135},"obj":"Disease"},{"id":"138","span":{"begin":137,"end":154},"obj":"Disease"},{"id":"139","span":{"begin":160,"end":174},"obj":"Disease"},{"id":"140","span":{"begin":323,"end":328},"obj":"Disease"},{"id":"141","span":{"begin":555,"end":583},"obj":"Disease"}],"attributes":[{"id":"A134","pred":"tao:has_database_id","subj":"134","obj":"Tax:9606"},{"id":"A135","pred":"tao:has_database_id","subj":"135","obj":"MESH:D003920"},{"id":"A136","pred":"tao:has_database_id","subj":"136","obj":"MESH:D006973"},{"id":"A137","pred":"tao:has_database_id","subj":"137","obj":"MESH:D002318"},{"id":"A138","pred":"tao:has_database_id","subj":"138","obj":"MESH:D008171"},{"id":"A139","pred":"tao:has_database_id","subj":"139","obj":"MESH:D007674"},{"id":"A140","pred":"tao:has_database_id","subj":"140","obj":"MESH:D003643"},{"id":"A141","pred":"tao:has_database_id","subj":"141","obj":"MESH:D009102"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}

{"project":"2_test","denotations":[{"id":"32664423-8254858-60101695","span":{"begin":696,"end":697},"obj":"8254858"},{"id":"32664423-31775846-60101696","span":{"begin":698,"end":699},"obj":"31775846"}],"text":"The following data were recorded: age, patient’s preexisting condition (current smoking, diabetes, hypertension, cardiovascular disease, pulmonary disease, and kidney disease), body mass index, ICU length of stay, duration of mechanical ventilation, ventilator-free days at day 28, need for prone position ventilation, and death in the ICU. Initial clinical laboratory workup included a complete blood count and serum biochemical tests. Chest CT scans were performed during the ICU hospitalization. The Simplified Acute Physiology Score (SAPS II) and the Sepsis-Related Organ Failure Assessment (SOFA) score at admission in ICU, at day 7 and 14 days after admission were used to assess severity [7,8]."}