PMC:7546130 / 4494-5652 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T32","span":{"begin":77,"end":93},"obj":"Body_part"},{"id":"T33","span":{"begin":89,"end":93},"obj":"Body_part"},{"id":"T34","span":{"begin":146,"end":153},"obj":"Body_part"},{"id":"T35","span":{"begin":241,"end":256},"obj":"Body_part"},{"id":"T36","span":{"begin":242,"end":253},"obj":"Body_part"}],"attributes":[{"id":"A32","pred":"fma_id","subj":"T32","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A34","pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A35","pred":"fma_id","subj":"T35","obj":"http://purl.org/sig/ont/fma/fma264829"},{"id":"A36","pred":"fma_id","subj":"T36","obj":"http://purl.org/sig/ont/fma/fma86578"}],"text":"Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14\nWhite blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58\nC-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121\nProcalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07\nIL (interleukin)-6 (ng/L) \u003c 3.4 491 32.7 NA NA\nFerritin (mcg/L) 30–400 605 378 NA NA\nD-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941\nFibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47\nActivated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2\nCreatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6\nUrea nitrogen (mg/dL) 21–54 90 172 135 167\nLactate dehydrogenase (U/L) 135–214 425 282 357 265\nArterial pH 7.35–7.45 7.36 7.35 7.23 7.34\nArterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1\nArterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4\nLactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8\nNasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive\nVentilation mode Controlled Controlled Controlled Assisted\nFraction of inspired oxygen 0.8 0.6 0.6 0.6\nPositive end-expiratory pressure (cmH2O) 15 15 13 12\nContinuous renal replacement therapy NO YES YES YES"}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T21","span":{"begin":83,"end":88},"obj":"Body_part"}],"attributes":[{"id":"A21","pred":"uberon_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"text":"Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14\nWhite blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58\nC-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121\nProcalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07\nIL (interleukin)-6 (ng/L) \u003c 3.4 491 32.7 NA NA\nFerritin (mcg/L) 30–400 605 378 NA NA\nD-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941\nFibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47\nActivated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2\nCreatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6\nUrea nitrogen (mg/dL) 21–54 90 172 135 167\nLactate dehydrogenase (U/L) 135–214 425 282 357 265\nArterial pH 7.35–7.45 7.36 7.35 7.23 7.34\nArterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1\nArterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4\nLactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8\nNasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive\nVentilation mode Controlled Controlled Controlled Assisted\nFraction of inspired oxygen 0.8 0.6 0.6 0.6\nPositive end-expiratory pressure (cmH2O) 15 15 13 12\nContinuous renal replacement therapy NO YES YES YES"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T36","span":{"begin":83,"end":88},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T37","span":{"begin":89,"end":93},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T38","span":{"begin":182,"end":185},"obj":"http://purl.obolibrary.org/obo/CLO_0001053"},{"id":"T39","span":{"begin":241,"end":256},"obj":"http://purl.obolibrary.org/obo/PR_000001393"},{"id":"T40","span":{"begin":270,"end":273},"obj":"http://purl.obolibrary.org/obo/CLO_0054064"},{"id":"T41","span":{"begin":416,"end":425},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T42","span":{"begin":626,"end":634},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"T43","span":{"begin":626,"end":634},"obj":"http://www.ebi.ac.uk/efo/EFO_0000814"},{"id":"T44","span":{"begin":668,"end":676},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"T45","span":{"begin":668,"end":676},"obj":"http://www.ebi.ac.uk/efo/EFO_0000814"},{"id":"T46","span":{"begin":738,"end":746},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"T47","span":{"begin":738,"end":746},"obj":"http://www.ebi.ac.uk/efo/EFO_0000814"},{"id":"T48","span":{"begin":792,"end":794},"obj":"http://purl.obolibrary.org/obo/CLO_0053799"}],"text":"Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14\nWhite blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58\nC-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121\nProcalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07\nIL (interleukin)-6 (ng/L) \u003c 3.4 491 32.7 NA NA\nFerritin (mcg/L) 30–400 605 378 NA NA\nD-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941\nFibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47\nActivated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2\nCreatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6\nUrea nitrogen (mg/dL) 21–54 90 172 135 167\nLactate dehydrogenase (U/L) 135–214 425 282 357 265\nArterial pH 7.35–7.45 7.36 7.35 7.23 7.34\nArterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1\nArterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4\nLactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8\nNasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive\nVentilation mode Controlled Controlled Controlled Assisted\nFraction of inspired oxygen 0.8 0.6 0.6 0.6\nPositive end-expiratory pressure (cmH2O) 15 15 13 12\nContinuous renal replacement therapy NO YES YES YES"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T10","span":{"begin":146,"end":153},"obj":"Chemical"},{"id":"T11","span":{"begin":238,"end":240},"obj":"Chemical"},{"id":"T13","span":{"begin":279,"end":281},"obj":"Chemical"},{"id":"T14","span":{"begin":282,"end":284},"obj":"Chemical"},{"id":"T15","span":{"begin":285,"end":293},"obj":"Chemical"},{"id":"T16","span":{"begin":317,"end":319},"obj":"Chemical"},{"id":"T17","span":{"begin":320,"end":322},"obj":"Chemical"},{"id":"T18","span":{"begin":488,"end":498},"obj":"Chemical"},{"id":"T19","span":{"begin":531,"end":535},"obj":"Chemical"},{"id":"T20","span":{"begin":536,"end":544},"obj":"Chemical"},{"id":"T21","span":{"begin":697,"end":703},"obj":"Chemical"},{"id":"T22","span":{"begin":767,"end":781},"obj":"Chemical"},{"id":"T23","span":{"begin":767,"end":773},"obj":"Chemical"},{"id":"T25","span":{"begin":1031,"end":1037},"obj":"Chemical"}],"attributes":[{"id":"A10","pred":"chebi_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A11","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A12","pred":"chebi_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A13","pred":"chebi_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/CHEBI_33696"},{"id":"A14","pred":"chebi_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_33696"},{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_82594"},{"id":"A16","pred":"chebi_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_33696"},{"id":"A17","pred":"chebi_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/CHEBI_33696"},{"id":"A18","pred":"chebi_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/CHEBI_16737"},{"id":"A19","pred":"chebi_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/CHEBI_16199"},{"id":"A20","pred":"chebi_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/CHEBI_25555"},{"id":"A21","pred":"chebi_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/CHEBI_25805"},{"id":"A22","pred":"chebi_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/CHEBI_16526"},{"id":"A23","pred":"chebi_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/CHEBI_27594"},{"id":"A24","pred":"chebi_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/CHEBI_33415"},{"id":"A25","pred":"chebi_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/CHEBI_25805"}],"text":"Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14\nWhite blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58\nC-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121\nProcalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07\nIL (interleukin)-6 (ng/L) \u003c 3.4 491 32.7 NA NA\nFerritin (mcg/L) 30–400 605 378 NA NA\nD-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941\nFibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47\nActivated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2\nCreatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6\nUrea nitrogen (mg/dL) 21–54 90 172 135 167\nLactate dehydrogenase (U/L) 135–214 425 282 357 265\nArterial pH 7.35–7.45 7.36 7.35 7.23 7.34\nArterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1\nArterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4\nLactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8\nNasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive\nVentilation mode Controlled Controlled Controlled Assisted\nFraction of inspired oxygen 0.8 0.6 0.6 0.6\nPositive end-expiratory pressure (cmH2O) 15 15 13 12\nContinuous renal replacement therapy NO YES YES YES"}

{"project":"LitCovid-sentences","denotations":[{"id":"T35","span":{"begin":0,"end":76},"obj":"Sentence"},{"id":"T36","span":{"begin":77,"end":134},"obj":"Sentence"},{"id":"T37","span":{"begin":135,"end":185},"obj":"Sentence"},{"id":"T38","span":{"begin":186,"end":237},"obj":"Sentence"},{"id":"T39","span":{"begin":238,"end":284},"obj":"Sentence"},{"id":"T40","span":{"begin":285,"end":322},"obj":"Sentence"},{"id":"T41","span":{"begin":323,"end":368},"obj":"Sentence"},{"id":"T42","span":{"begin":369,"end":415},"obj":"Sentence"},{"id":"T43","span":{"begin":416,"end":487},"obj":"Sentence"},{"id":"T44","span":{"begin":488,"end":530},"obj":"Sentence"},{"id":"T45","span":{"begin":531,"end":573},"obj":"Sentence"},{"id":"T46","span":{"begin":574,"end":625},"obj":"Sentence"},{"id":"T47","span":{"begin":626,"end":667},"obj":"Sentence"},{"id":"T48","span":{"begin":668,"end":737},"obj":"Sentence"},{"id":"T49","span":{"begin":738,"end":814},"obj":"Sentence"},{"id":"T50","span":{"begin":815,"end":855},"obj":"Sentence"},{"id":"T51","span":{"begin":856,"end":950},"obj":"Sentence"},{"id":"T52","span":{"begin":951,"end":1009},"obj":"Sentence"},{"id":"T53","span":{"begin":1010,"end":1053},"obj":"Sentence"},{"id":"T54","span":{"begin":1054,"end":1106},"obj":"Sentence"},{"id":"T55","span":{"begin":1107,"end":1158},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14\nWhite blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58\nC-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121\nProcalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07\nIL (interleukin)-6 (ng/L) \u003c 3.4 491 32.7 NA NA\nFerritin (mcg/L) 30–400 605 378 NA NA\nD-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941\nFibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47\nActivated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2\nCreatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6\nUrea nitrogen (mg/dL) 21–54 90 172 135 167\nLactate dehydrogenase (U/L) 135–214 425 282 357 265\nArterial pH 7.35–7.45 7.36 7.35 7.23 7.34\nArterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1\nArterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4\nLactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8\nNasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive\nVentilation mode Controlled Controlled Controlled Assisted\nFraction of inspired oxygen 0.8 0.6 0.6 0.6\nPositive end-expiratory pressure (cmH2O) 15 15 13 12\nContinuous renal replacement therapy NO YES YES YES"}

{"project":"LitCovid-PubTator","denotations":[{"id":"42","span":{"begin":135,"end":153},"obj":"Gene"},{"id":"43","span":{"begin":242,"end":256},"obj":"Gene"},{"id":"44","span":{"begin":369,"end":379},"obj":"Gene"},{"id":"45","span":{"begin":488,"end":498},"obj":"Chemical"},{"id":"46","span":{"begin":531,"end":535},"obj":"Chemical"},{"id":"47","span":{"begin":536,"end":544},"obj":"Chemical"}],"attributes":[{"id":"A42","pred":"tao:has_database_id","subj":"42","obj":"Gene:1401"},{"id":"A43","pred":"tao:has_database_id","subj":"43","obj":"Gene:3569"},{"id":"A44","pred":"tao:has_database_id","subj":"44","obj":"Gene:2244"},{"id":"A45","pred":"tao:has_database_id","subj":"45","obj":"MESH:D003404"},{"id":"A46","pred":"tao:has_database_id","subj":"46","obj":"MESH:D014508"},{"id":"A47","pred":"tao:has_database_id","subj":"47","obj":"MESH:D009584"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14\nWhite blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58\nC-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121\nProcalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07\nIL (interleukin)-6 (ng/L) \u003c 3.4 491 32.7 NA NA\nFerritin (mcg/L) 30–400 605 378 NA NA\nD-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941\nFibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47\nActivated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2\nCreatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6\nUrea nitrogen (mg/dL) 21–54 90 172 135 167\nLactate dehydrogenase (U/L) 135–214 425 282 357 265\nArterial pH 7.35–7.45 7.36 7.35 7.23 7.34\nArterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1\nArterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4\nLactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8\nNasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive\nVentilation mode Controlled Controlled Controlled Assisted\nFraction of inspired oxygen 0.8 0.6 0.6 0.6\nPositive end-expiratory pressure (cmH2O) 15 15 13 12\nContinuous renal replacement therapy NO YES YES YES"}