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PMC:7546130 / 4494-5652 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T32 77-93 Body_part denotes White blood cell http://purl.org/sig/ont/fma/fma62852
T33 89-93 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T34 146-153 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T35 241-256 Body_part denotes (interleukin)-6 http://purl.org/sig/ont/fma/fma264829
T36 242-253 Body_part denotes interleukin http://purl.org/sig/ont/fma/fma86578

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T21 83-88 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T36 83-88 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T37 89-93 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T38 182-185 http://purl.obolibrary.org/obo/CLO_0001053 denotes 121
T39 241-256 http://purl.obolibrary.org/obo/PR_000001393 denotes (interleukin)-6
T40 270-273 http://purl.obolibrary.org/obo/CLO_0054064 denotes 491
T41 416-425 http://purl.obolibrary.org/obo/CLO_0001658 denotes Activated
T42 626-634 http://purl.obolibrary.org/obo/UBERON_0001637 denotes Arterial
T43 626-634 http://www.ebi.ac.uk/efo/EFO_0000814 denotes Arterial
T44 668-676 http://purl.obolibrary.org/obo/UBERON_0001637 denotes Arterial
T45 668-676 http://www.ebi.ac.uk/efo/EFO_0000814 denotes Arterial
T46 738-746 http://purl.obolibrary.org/obo/UBERON_0001637 denotes Arterial
T47 738-746 http://www.ebi.ac.uk/efo/EFO_0000814 denotes Arterial
T48 792-794 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T10 146-153 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T11 238-240 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T13 279-281 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T14 282-284 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T15 285-293 Chemical denotes Ferritin http://purl.obolibrary.org/obo/CHEBI_82594
T16 317-319 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T17 320-322 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T18 488-498 Chemical denotes Creatinine http://purl.obolibrary.org/obo/CHEBI_16737
T19 531-535 Chemical denotes Urea http://purl.obolibrary.org/obo/CHEBI_16199
T20 536-544 Chemical denotes nitrogen http://purl.obolibrary.org/obo/CHEBI_25555
T21 697-703 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T22 767-781 Chemical denotes carbon dioxide http://purl.obolibrary.org/obo/CHEBI_16526
T23 767-773 Chemical denotes carbon http://purl.obolibrary.org/obo/CHEBI_27594|http://purl.obolibrary.org/obo/CHEBI_33415
T25 1031-1037 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T35 0-76 Sentence denotes Variable Reference range, adults On admission ICU day 3 ICU day 7 ICU day 14
T36 77-134 Sentence denotes White blood cell (109/L) 4.50–9.80 9.58 13.99 24.14 23.58
T37 135-185 Sentence denotes C-reactive protein (mg/L) 0.0–5.0 137 77.7 138 121
T38 186-237 Sentence denotes Procalcitonin (mcg/L) 0.00–0.25 1.37 2.09 1.67 2.07
T39 238-284 Sentence denotes IL (interleukin)-6 (ng/L) < 3.4 491 32.7 NA NA
T40 285-322 Sentence denotes Ferritin (mcg/L) 30–400 605 378 NA NA
T41 323-368 Sentence denotes D-Dimer (mcg/L) 0.00–500.0 1605 810 3497 6941
T42 369-415 Sentence denotes Fibrinogen (g/L) 2.00–4.00 6.10 3.84 6.06 8.47
T43 416-487 Sentence denotes Activated partial-thromboplastin time (sec) 28.0–40.0 39 27.3 33.6 32.2
T44 488-530 Sentence denotes Creatinine (mg/dL) 0.51–0.95 2.4 5 2.9 2.6
T45 531-573 Sentence denotes Urea nitrogen (mg/dL) 21–54 90 172 135 167
T46 574-625 Sentence denotes Lactate dehydrogenase (U/L) 135–214 425 282 357 265
T47 626-667 Sentence denotes Arterial pH 7.35–7.45 7.36 7.35 7.23 7.34
T48 668-737 Sentence denotes Arterial partial pressure of oxygen (mmHg) 83–108 71.8 73.3 80.8 56.1
T49 738-814 Sentence denotes Arterial partial pressure of carbon dioxide (mmHg) 32–45 42.4 48.1 54.1 55.4
T50 815-855 Sentence denotes Lactate (mmol/L) 0.5–1.6 1.1 1.1 1.6 0.8
T51 856-950 Sentence denotes Nasopharyngeal swab Positive-quite positive-negative Positive Positive Positive Quite positive
T52 951-1009 Sentence denotes Ventilation mode Controlled Controlled Controlled Assisted
T53 1010-1053 Sentence denotes Fraction of inspired oxygen 0.8 0.6 0.6 0.6
T54 1054-1106 Sentence denotes Positive end-expiratory pressure (cmH2O) 15 15 13 12
T55 1107-1158 Sentence denotes Continuous renal replacement therapy NO YES YES YES

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
42 135-153 Gene denotes C-reactive protein Gene:1401
43 242-256 Gene denotes interleukin)-6 Gene:3569
44 369-379 Gene denotes Fibrinogen Gene:2244
45 488-498 Chemical denotes Creatinine MESH:D003404
46 531-535 Chemical denotes Urea MESH:D014508
47 536-544 Chemical denotes nitrogen MESH:D009584