PMC:7543426 / 26827-27971
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T282 | 371-376 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T283 | 377-383 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T284 | 445-450 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T285 | 579-584 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T286 | 657-662 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T287 | 663-670 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
| T288 | 699-710 | Body_part | denotes | cytoplasmic | http://purl.org/sig/ont/fma/fma66835 |
| T289 | 920-924 | Body_part | denotes | body | http://purl.org/sig/ont/fma/fma256135 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T146 | 371-376 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T147 | 377-383 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T148 | 445-450 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T149 | 579-584 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T150 | 657-662 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T196 | 53-61 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T197 | 197-205 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T198 | 303-311 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T199 | 475-483 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T200 | 609-617 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T201 | 847-855 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T202 | 1135-1143 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T407 | 91-92 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T408 | 261-262 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T409 | 371-376 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T410 | 371-376 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T411 | 398-399 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T412 | 445-450 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T413 | 445-450 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T414 | 579-584 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T415 | 579-584 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T416 | 657-662 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T417 | 657-662 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T418 | 914-924 | http://purl.obolibrary.org/obo/UBERON_0013702 | denotes | Whole-body |
| T419 | 962-963 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T420 | 1045-1047 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
| T421 | 1049-1051 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 690 | 484-492 | Species | denotes | patients | Tax:9606 |
| 691 | 609-619 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 692 | 53-61 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 693 | 197-205 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 694 | 246-250 | Disease | denotes | died | MESH:D003643 |
| 695 | 303-311 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 696 | 475-483 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 697 | 497-501 | Disease | denotes | died | MESH:D003643 |
| 698 | 847-855 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 699 | 1135-1143 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T42 | 1080-1092 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T295 | 0-41 | Sentence | denotes | There were some limitations of our study. |
| T296 | 42-260 | Sentence | denotes | Whilst the COVID-19 cases in our study were from a range of age, sex, and comorbidities, we cannot accurately say our findings are fully representative of COVID-19 pathology in the large numbers who have died in Italy. |
| T297 | 261-397 | Sentence | denotes | A range of neurological manifestations of COVID-19 have been reported [32]; however, we were unable to obtain brain tissue in our study. |
| T298 | 398-620 | Sentence | denotes | A recent [33] histopathological examination of brain specimens obtained from COVID-19 patients who died up to 32 days after symptom onset found only hypoxic changes and no specific brain changes attributable to SARS-CoV-2. |
| T299 | 621-856 | Sentence | denotes | Further pathological examination of brain tissues needs to be performed where cytoplasmic viral staining, immunohistochemical, and electron microscope analysis may shed further light on the neuropathological manifestations of COVID-19. |
| T300 | 857-913 | Sentence | denotes | It is important that autopsy studies are given priority. |
| T301 | 914-1144 | Sentence | denotes | Whole-body complete autopsy studies from across a wide range of geographical background, age, ethnic group, and comorbidities [10, 34, 35] are required to define the pathogenesis and the complete spectrum of pathology in COVID-19. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32914853-32530583-61098674 | 332-334 | 32530583 | denotes | 32 |
| 32914853-32660520-61098675 | 408-410 | 32660520 | denotes | 33 |
| 32914853-32217650-61098676 | 1045-1047 | 32217650 | denotes | 34 |
| 32914853-32320003-61098677 | 1049-1051 | 32320003 | denotes | 35 |