PMC:7543426 / 17966-20816
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T161 | 0-5 | Body_part | denotes | Liver | http://purl.org/sig/ont/fma/fma7197 |
T162 | 7-13 | Body_part | denotes | Kidney | http://purl.org/sig/ont/fma/fma7203 |
T163 | 15-21 | Body_part | denotes | Spleen | http://purl.org/sig/ont/fma/fma7196 |
T164 | 27-38 | Body_part | denotes | Bone Marrow | http://purl.org/sig/ont/fma/fma9608 |
T165 | 49-54 | Body_part | denotes | Liver | http://purl.org/sig/ont/fma/fma7197 |
T166 | 86-91 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T167 | 115-125 | Body_part | denotes | parenchyma | http://purl.org/sig/ont/fma/fma45732 |
T168 | 183-193 | Body_part | denotes | sinusoidal | http://purl.org/sig/ont/fma/fma63131 |
T169 | 226-241 | Body_part | denotes | red blood cells | http://purl.org/sig/ont/fma/fma62845 |
T170 | 236-241 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T171 | 251-265 | Body_part | denotes | space of Disse | http://purl.org/sig/ont/fma/fma63162 |
T172 | 343-348 | Body_part | denotes | veins | http://purl.org/sig/ont/fma/fma63814 |
T173 | 353-363 | Body_part | denotes | hepatocyte | http://purl.org/sig/ont/fma/fma14515 |
T174 | 580-585 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T175 | 590-596 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T176 | 598-600 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T177 | 602-607 | Body_part | denotes | Liver | http://purl.org/sig/ont/fma/fma7197 |
T178 | 608-614 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T179 | 621-631 | Body_part | denotes | sinusoidal | http://purl.org/sig/ont/fma/fma63131 |
T180 | 664-679 | Body_part | denotes | red blood cells | http://purl.org/sig/ont/fma/fma62845 |
T181 | 674-679 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T182 | 689-703 | Body_part | denotes | space of Disse | http://purl.org/sig/ont/fma/fma63162 |
T183 | 726-730 | Body_part | denotes | vein | http://purl.org/sig/ont/fma/fma50723 |
T184 | 743-745 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T185 | 769-771 | Body_part | denotes | A3 | http://purl.org/sig/ont/fma/fma66599 |
T186 | 832-834 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T187 | 836-838 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T188 | 934-940 | Body_part | denotes | Kidney | http://purl.org/sig/ont/fma/fma7203 |
T189 | 941-969 | Body_part | denotes | glomerular endothelial cells | http://purl.org/sig/ont/fma/fma70970 |
T190 | 964-969 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T191 | 1029-1043 | Body_part | denotes | Bowman capsule | http://purl.org/sig/ont/fma/fma15626 |
T192 | 1036-1043 | Body_part | denotes | capsule | http://purl.org/sig/ont/fma/fma85272 |
T193 | 1181-1183 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T194 | 1226-1232 | Body_part | denotes | Kidney | http://purl.org/sig/ont/fma/fma7203 |
T195 | 1238-1245 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
T196 | 1471-1499 | Body_part | denotes | glomerular endothelial cells | http://purl.org/sig/ont/fma/fma70970 |
T197 | 1494-1499 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T198 | 1545-1559 | Body_part | denotes | Bowman capsule | http://purl.org/sig/ont/fma/fma15626 |
T199 | 1552-1559 | Body_part | denotes | capsule | http://purl.org/sig/ont/fma/fma85272 |
T200 | 1728-1734 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T201 | 1755-1761 | Body_part | denotes | Spleen | http://purl.org/sig/ont/fma/fma7196 |
T202 | 1767-1774 | Body_part | denotes | spleens | http://purl.org/sig/ont/fma/fma7196 |
T203 | 1849-1860 | Body_part | denotes | white pulps | http://purl.org/sig/ont/fma/fma62805 |
T204 | 1933-1941 | Body_part | denotes | red pulp | http://purl.org/sig/ont/fma/fma15844 |
T205 | 2002-2008 | Body_part | denotes | spleen | http://purl.org/sig/ont/fma/fma7196 |
T206 | 2013-2024 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T207 | 2026-2028 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T208 | 2033-2035 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T209 | 2083-2093 | Body_part | denotes | white pulp | http://purl.org/sig/ont/fma/fma62805 |
T210 | 2106-2118 | Body_part | denotes | Bone marrows | http://purl.org/sig/ont/fma/fma9608 |
T211 | 2119-2125 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T212 | 2165-2176 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T213 | 2189-2198 | Body_part | denotes | adipocyte | http://purl.org/sig/ont/fma/fma63880 |
T214 | 2212-2225 | Body_part | denotes | Megakaryocyte | http://purl.org/sig/ont/fma/fma83555 |
T215 | 2307-2318 | Body_part | denotes | Macrophages | http://purl.org/sig/ont/fma/fma63261 |
T216 | 2342-2353 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T217 | 2354-2360 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T218 | 2372-2377 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T219 | 2439-2441 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T220 | 2443-2445 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T221 | 2473-2484 | Body_part | denotes | Bone Marrow | http://purl.org/sig/ont/fma/fma9608 |
T222 | 2514-2526 | Body_part | denotes | bone marrows | http://purl.org/sig/ont/fma/fma9608 |
T223 | 2577-2588 | Body_part | denotes | bone marrow | http://purl.org/sig/ont/fma/fma9608 |
T224 | 2601-2610 | Body_part | denotes | adipocyte | http://purl.org/sig/ont/fma/fma63880 |
T225 | 2657-2671 | Body_part | denotes | Megakaryocytes | http://purl.org/sig/ont/fma/fma83555 |
T226 | 2751-2762 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T84 | 0-5 | Body_part | denotes | Liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T85 | 7-13 | Body_part | denotes | Kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T86 | 15-21 | Body_part | denotes | Spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T87 | 27-38 | Body_part | denotes | Bone Marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T88 | 49-54 | Body_part | denotes | Liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T89 | 86-91 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T90 | 115-125 | Body_part | denotes | parenchyma | http://purl.obolibrary.org/obo/UBERON_0000353 |
T91 | 230-235 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T92 | 580-585 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T93 | 590-596 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T94 | 602-607 | Body_part | denotes | Liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T95 | 608-614 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T96 | 668-673 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T97 | 726-730 | Body_part | denotes | vein | http://purl.obolibrary.org/obo/UBERON_0001638 |
T98 | 934-940 | Body_part | denotes | Kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T99 | 1036-1043 | Body_part | denotes | capsule | http://purl.obolibrary.org/obo/UBERON_0003893 |
T100 | 1169-1174 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
T101 | 1226-1232 | Body_part | denotes | Kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T102 | 1552-1559 | Body_part | denotes | capsule | http://purl.obolibrary.org/obo/UBERON_0003893 |
T103 | 1728-1734 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T104 | 1755-1761 | Body_part | denotes | Spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T105 | 1767-1774 | Body_part | denotes | spleens | http://purl.obolibrary.org/obo/UBERON_0002106 |
T106 | 2002-2008 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T107 | 2013-2024 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T108 | 2106-2118 | Body_part | denotes | Bone marrows | http://purl.obolibrary.org/obo/UBERON_0002371 |
T109 | 2119-2125 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T110 | 2165-2176 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T111 | 2342-2353 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T112 | 2354-2360 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T113 | 2427-2432 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
T114 | 2473-2484 | Body_part | denotes | Bone Marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
T115 | 2514-2526 | Body_part | denotes | bone marrows | http://purl.obolibrary.org/obo/UBERON_0002371 |
T116 | 2577-2588 | Body_part | denotes | bone marrow | http://purl.obolibrary.org/obo/UBERON_0002371 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T141 | 1068-1080 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
T142 | 1090-1110 | Disease | denotes | glomerular sclerosis | http://purl.obolibrary.org/obo/MONDO_0000490 |
T143 | 1349-1360 | Disease | denotes | depressions | http://purl.obolibrary.org/obo/MONDO_0002050 |
T144 | 1603-1615 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
T145 | 1633-1653 | Disease | denotes | glomerular sclerosis | http://purl.obolibrary.org/obo/MONDO_0000490 |
T146 | 1728-1742 | Disease | denotes | kidney disease | http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240 |
T148 | 2226-2237 | Disease | denotes | hyperplasia | http://purl.obolibrary.org/obo/MONDO_0005043 |
T149 | 2672-2683 | Disease | denotes | hyperplasia | http://purl.obolibrary.org/obo/MONDO_0005043 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T258 | 0-5 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | Liver |
T259 | 0-5 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | Liver |
T260 | 7-13 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | Kidney |
T261 | 7-13 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | Kidney |
T262 | 7-13 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | Kidney |
T263 | 15-21 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | Spleen |
T264 | 27-31 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | Bone |
T265 | 49-54 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | Liver |
T266 | 49-54 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | Liver |
T267 | 86-91 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T268 | 86-91 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T269 | 226-241 | http://purl.obolibrary.org/obo/CL_0000232 | denotes | red blood cells |
T270 | 274-277 | http://purl.obolibrary.org/obo/CLO_0001429 | denotes | 5A1 |
T271 | 286-287 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T272 | 343-348 | http://purl.obolibrary.org/obo/UBERON_0001638 | denotes | veins |
T273 | 343-348 | http://www.ebi.ac.uk/efo/EFO_0000816 | denotes | veins |
T274 | 511-514 | http://purl.obolibrary.org/obo/CLO_0001429 | denotes | 5A1 |
T275 | 580-585 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T276 | 580-585 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T277 | 590-596 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T278 | 590-596 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T279 | 590-596 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T280 | 602-607 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | Liver |
T281 | 602-607 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | Liver |
T282 | 664-679 | http://purl.obolibrary.org/obo/CL_0000232 | denotes | red blood cells |
T283 | 726-730 | http://purl.obolibrary.org/obo/UBERON_0001638 | denotes | vein |
T284 | 726-730 | http://www.ebi.ac.uk/efo/EFO_0000816 | denotes | vein |
T285 | 743-745 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T286 | 769-771 | http://purl.obolibrary.org/obo/CLO_0001577 | denotes | A3 |
T287 | 836-838 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T288 | 934-940 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | Kidney |
T289 | 934-940 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | Kidney |
T290 | 934-940 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | Kidney |
T291 | 952-969 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cells |
T292 | 1045-1047 | http://purl.obolibrary.org/obo/CLO_0001812 | denotes | B3 |
T293 | 1192-1194 | http://purl.obolibrary.org/obo/CLO_0001812 | denotes | B3 |
T294 | 1226-1232 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | Kidney |
T295 | 1226-1232 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | Kidney |
T296 | 1226-1232 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | Kidney |
T297 | 1238-1245 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
T298 | 1238-1245 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
T299 | 1238-1245 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
T300 | 1482-1499 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cells |
T301 | 1676-1679 | http://purl.obolibrary.org/obo/CLO_0052942 | denotes | 5B4 |
T302 | 1706-1707 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T303 | 1728-1734 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T304 | 1728-1734 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T305 | 1728-1734 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T306 | 1755-1761 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | Spleen |
T307 | 1767-1774 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleens |
T308 | 2002-2008 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleen |
T309 | 2013-2017 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T310 | 2033-2035 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T311 | 2106-2110 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | Bone |
T312 | 2165-2169 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T313 | 2189-2198 | http://purl.obolibrary.org/obo/CL_0000136 | denotes | adipocyte |
T314 | 2303-2305 | http://purl.obolibrary.org/obo/CLO_0051741 | denotes | C1 |
T315 | 2320-2324 | http://purl.obolibrary.org/obo/PR_000002064 | denotes | CD68 |
T316 | 2342-2346 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T317 | 2362-2364 | http://purl.obolibrary.org/obo/CLO_0002105 | denotes | C2 |
T318 | 2362-2364 | http://purl.obolibrary.org/obo/CLO_0051742 | denotes | C2 |
T319 | 2366-2370 | http://purl.obolibrary.org/obo/PR_000002064 | denotes | CD68 |
T320 | 2372-2377 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T321 | 2443-2445 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T322 | 2450-2452 | http://purl.obolibrary.org/obo/CLO_0002105 | denotes | C2 |
T323 | 2450-2452 | http://purl.obolibrary.org/obo/CLO_0051742 | denotes | C2 |
T324 | 2473-2477 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | Bone |
T325 | 2514-2518 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T326 | 2577-2581 | http://purl.obolibrary.org/obo/UBERON_0002481 | denotes | bone |
T327 | 2601-2610 | http://purl.obolibrary.org/obo/CL_0000136 | denotes | adipocyte |
T328 | 2764-2768 | http://purl.obolibrary.org/obo/PR_000002064 | denotes | CD68 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
474 | 99-107 | Species | denotes | patients | Tax:9606 |
475 | 494-502 | Species | denotes | patients | Tax:9606 |
476 | 364-372 | Disease | denotes | necrosis | MESH:D009336 |
477 | 457-466 | Disease | denotes | steatosis | MESH:D005234 |
488 | 1140-1143 | Chemical | denotes | H&E | |
489 | 1145-1157 | Chemical | denotes | haematoxylin | MESH:D006416 |
490 | 1162-1167 | Chemical | denotes | eosin | MESH:D004801 |
491 | 751-767 | Disease | denotes | hepatic necrosis | MESH:D056486 |
492 | 866-889 | Disease | denotes | microvacuolar steatosis | MESH:D005234 |
493 | 934-951 | Disease | denotes | Kidney glomerular | MESH:D007674 |
494 | 1068-1080 | Disease | denotes | inflammation | MESH:D007249 |
495 | 1090-1110 | Disease | denotes | glomerular sclerosis | MESH:D007674 |
504 | 1253-1261 | Species | denotes | patients | Tax:9606 |
505 | 1435-1443 | Species | denotes | patients | Tax:9606 |
506 | 1689-1697 | Species | denotes | patients | Tax:9606 |
507 | 1349-1360 | Disease | denotes | depressions | MESH:D000275 |
508 | 1407-1415 | Disease | denotes | fibrosis | MESH:D005355 |
509 | 1603-1615 | Disease | denotes | inflammation | MESH:D007249 |
510 | 1633-1653 | Disease | denotes | glomerular sclerosis | MESH:D007674 |
511 | 1728-1742 | Disease | denotes | kidney disease | MESH:D007674 |
514 | 1782-1790 | Species | denotes | patients | Tax:9606 |
515 | 1898-1917 | Disease | denotes | lymphoid hypoplasia | MESH:D008224 |
525 | 2095-2104 | Gene | denotes | B1 and B2 | Gene:28905 |
526 | 2320-2324 | Gene | denotes | CD68 | Gene:968 |
527 | 2366-2370 | Gene | denotes | CD68 | Gene:968 |
528 | 2439-2452 | Gene | denotes | A1, A2, B2–C2 | Gene:28874 |
529 | 2274-2277 | Chemical | denotes | H&E | |
530 | 2279-2291 | Chemical | denotes | haematoxylin | MESH:D006416 |
531 | 2296-2301 | Chemical | denotes | eosin | MESH:D004801 |
532 | 2037-2056 | Disease | denotes | Lymphoid hypoplasia | MESH:D008224 |
533 | 2226-2237 | Disease | denotes | hyperplasia | MESH:D006965 |
538 | 2764-2768 | Gene | denotes | CD68 | Gene:968 |
539 | 2634-2642 | Species | denotes | patients | Tax:9606 |
540 | 2711-2719 | Species | denotes | patients | Tax:9606 |
541 | 2672-2683 | Disease | denotes | hyperplasia | MESH:D006965 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T64 | 457-466 | Phenotype | denotes | steatosis | http://purl.obolibrary.org/obo/HP_0001397 |
T65 | 751-767 | Phenotype | denotes | hepatic necrosis | http://purl.obolibrary.org/obo/HP_0002605 |
T66 | 880-889 | Phenotype | denotes | steatosis | http://purl.obolibrary.org/obo/HP_0001397 |
T67 | 1090-1110 | Phenotype | denotes | glomerular sclerosis | http://purl.obolibrary.org/obo/HP_0000096 |
T68 | 1349-1360 | Phenotype | denotes | depressions | http://purl.obolibrary.org/obo/HP_0000716 |
T69 | 1633-1653 | Phenotype | denotes | glomerular sclerosis | http://purl.obolibrary.org/obo/HP_0000096 |
T70 | 1728-1742 | Phenotype | denotes | kidney disease | http://purl.obolibrary.org/obo/HP_0000112 |
T71 | 2401-2417 | Phenotype | denotes | hemophagocytosis | http://purl.obolibrary.org/obo/HP_0012156 |
T72 | 2812-2828 | Phenotype | denotes | hemophagocytosis | http://purl.obolibrary.org/obo/HP_0012156 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21 | 364-372 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
T22 | 364-372 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T23 | 364-372 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
T24 | 364-372 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T25 | 759-767 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
T26 | 759-767 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T27 | 759-767 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
T28 | 759-767 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T29 | 1068-1080 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
T30 | 1603-1615 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-PD-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
---|---|---|---|---|---|
T5 | 389-392 | GlycoEpitope | denotes | 5A3 | http://www.glycoepitope.jp/epitopes/AN0387 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T218 | 0-47 | Sentence | denotes | Liver, Kidney, Spleen, and Bone Marrow Findings |
T219 | 49-55 | Sentence | denotes | Liver. |
T220 | 56-137 | Sentence | denotes | Macroscopic inspection of the liver of all patients showed parenchyma congestion. |
T221 | 138-424 | Sentence | denotes | The main findings at histological level were sinusoidal congestion and extravasation of red blood cells into the space of Disse (Figure 5A1) and in a few cases this was associated with congestion of small veins and hepatocyte necrosis (Figure 5A2 and 5A3) and infiltration (Figure 5A4). |
T222 | 425-543 | Sentence | denotes | Macrovacuolar and microvacuolar steatosis was seen mostly in group 2 patients (Figure 5A1, 5A2, and 5A4, and Table 3). |
T223 | 544-553 | Sentence | denotes | Figure 5. |
T224 | 555-597 | Sentence | denotes | Pathological findings in liver and kidney. |
T225 | 598-704 | Sentence | denotes | A1, Liver tissue shows sinusoidal congestion and extravasation of red blood cells into the space of Disse. |
T226 | 705-787 | Sentence | denotes | In some cases, small vein congestion (A2) and hepatic necrosis (A3) were reported. |
T227 | 788-831 | Sentence | denotes | A4, Inflammatory infiltration was observed. |
T228 | 832-929 | Sentence | denotes | A1, A2, and A4, Macrovacuolar and microvacuolar steatosis were observed in the majority of cases. |
T229 | 930-983 | Sentence | denotes | B1, Kidney glomerular endothelial cells were swollen. |
T230 | 984-1044 | Sentence | denotes | B2, Fibrin deposit is visible underneath the Bowman capsule. |
T231 | 1045-1125 | Sentence | denotes | B3, Tubulointerstitial inflammation and (B4) glomerular sclerosis were observed. |
T232 | 1126-1168 | Sentence | denotes | Abbreviation: H&E, haematoxylin and eosin. |
T233 | 1169-1224 | Sentence | denotes | Scale bars: A1–A4, and B3, 50 µm; B1, B2, and B4, 14 µm |
T234 | 1226-1233 | Sentence | denotes | Kidney. |
T235 | 1234-1318 | Sentence | denotes | The kidneys of all patients generally had normal shape with reduced volume and size. |
T236 | 1319-1361 | Sentence | denotes | Outer surfaces showed reddish depressions. |
T237 | 1362-1500 | Sentence | denotes | Histological examination showed interstitial fibrosis, mainly in group 2 patients (Figure 5B1), with swollen glomerular endothelial cells. |
T238 | 1501-1573 | Sentence | denotes | Fibrin deposits were visible underneath the Bowman capsule (Figure 5B2). |
T239 | 1574-1753 | Sentence | denotes | Chronic tubular-interstitial inflammation (Figure 5B3) and glomerular sclerosis were observed (Figure 5B4) even in patients without a history of previous kidney disease (Table 3). |
T240 | 1755-1762 | Sentence | denotes | Spleen. |
T241 | 1763-1836 | Sentence | denotes | The spleens of all patients had normal shape but reduced volume and size. |
T242 | 1837-1977 | Sentence | denotes | The splenic white pulps of all 4 of the group 2 cases showed lymphoid hypoplasia with congested red pulp (Figure 6A1 and 6A2), and Table 3). |
T243 | 1978-1987 | Sentence | denotes | Figure 6. |
T244 | 1989-2025 | Sentence | denotes | Histology of spleen and bone marrow. |
T245 | 2026-2094 | Sentence | denotes | A1 and A2, Lymphoid hypoplasia is visible in the splenic white pulp. |
T246 | 2095-2211 | Sentence | denotes | B1 and B2, Bone marrows tissue shows replacement of red hematopoietic bone marrow with yellow adipocyte-rich marrow. |
T247 | 2212-2259 | Sentence | denotes | Megakaryocyte hyperplasia is observed (arrows). |
T248 | 2260-2302 | Sentence | denotes | Abbreviation: H&E, haematoxylin and eosin. |
T249 | 2303-2361 | Sentence | denotes | C1, Macrophages (CD68+) are present in bone marrow tissue. |
T250 | 2362-2426 | Sentence | denotes | C2, CD68+ cells displaying features of hemophagocytosis (arrow). |
T251 | 2427-2471 | Sentence | denotes | Scale bars: A1, A2, B2–C2, 7 µm; B1, 100 µm. |
T252 | 2473-2485 | Sentence | denotes | Bone Marrow. |
T253 | 2486-2656 | Sentence | denotes | Microscopic analysis of the bone marrows generally showed replacement of red hematopoietic bone marrow with yellow adipocyte-rich marrow in group 1 patients (Figure 6B1). |
T254 | 2657-2741 | Sentence | denotes | Megakaryocytes hyperplasia (Figure 6B2) was seen in 2 patients of group 2 (Table 3). |
T255 | 2742-2850 | Sentence | denotes | Numerous macrophages (CD68+) were seen and they displayed features of hemophagocytosis (Figure 6C1 and 6C2). |