PMC:7519301 / 4356-4665
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T18 | 158-169 | Body_part | denotes | amino acids | http://purl.org/sig/ont/fma/fma82739 |
| T19 | 231-238 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T40 | 60-68 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T41 | 60-64 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T42 | 292-300 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T43 | 292-296 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T40 | 203-205 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T41 | 210-212 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T42 | 210-212 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T43 | 245-247 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T44 | 248-250 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
| T45 | 248-250 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
| T46 | 264-265 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T14 | 158-169 | Chemical | denotes | amino acids | http://purl.obolibrary.org/obo/CHEBI_33709 |
| T15 | 158-163 | Chemical | denotes | amino | http://purl.obolibrary.org/obo/CHEBI_46882 |
| T16 | 164-169 | Chemical | denotes | acids | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T17 | 210-212 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
| T18 | 231-238 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T19 | 248-250 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 113 | 83-89 | Gene | denotes | ORF1ab | Gene:43740578 |
| 114 | 122-123 | Gene | denotes | S | Gene:43740568 |
| 120 | 60-70 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 121 | 292-302 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T34 | 0-309 | Sentence | denotes | Interestingly, the RmYN02 sequence, which is the closest to SARS-CoV-2 in the long ORF1ab but more distant than RaTG13 in S, showed the insertion of multiple amino acids at the cleavage site between the S1 and S2 subunits of the S protein (this S1/S2 insertion is a characteristic feature of SARS-CoV-2) (10). |