PMC:7473770 / 25294-26048
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T169 | 217-228 | Body_part | denotes | lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
T170 | 274-291 | Body_part | denotes | cell segmentation | http://purl.org/sig/ont/fma/fma242660 |
T171 | 274-278 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T172 | 353-357 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T173 | 420-424 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T174 | 478-482 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T175 | 521-527 | Body_part | denotes | radius | http://purl.org/sig/ont/fma/fma23463 |
T176 | 539-543 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T177 | 621-626 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T178 | 717-723 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T158 | 717-723 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T238 | 26-34 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T239 | 100-101 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T240 | 162-163 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T241 | 274-278 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T242 | 353-357 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T243 | 373-374 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T244 | 387-388 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T245 | 420-424 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T246 | 445-446 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T247 | 478-482 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T248 | 498-499 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T249 | 539-543 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T250 | 587-591 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T251 | 621-626 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T252 | 683-684 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 35-44 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
T26 | 279-291 | http://purl.obolibrary.org/obo/GO_0035282 | denotes | segmentation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T192 | 0-207 | Sentence | denotes | The severeness of hyaline membrane formation is case-specific, as the yellow rendering in Figure 8a,b,d demonstrates reduced amounts of deposits for patient I in a subvolume of parallel-beam reconstructions. |
T193 | 208-320 | Sentence | denotes | Further, lymphocytes (red) were identified based on the automated cell segmentation (see Materials and methods). |
T194 | 321-449 | Sentence | denotes | For clearer visualization, each cell is rendered as a sphere with a size corresponding to the mean cell volume in Figure 8a,b,d. |
T195 | 450-646 | Sentence | denotes | Based on convolution of the cell positions with a sphere of 100μm in radius, the local cell density was calculated (Töpperwien et al., 2018) and presented as 3D-maps of cells/mm3 in Figure 8c,e. |
T196 | 647-754 | Sentence | denotes | This concept was then translated to a 3D-stitched volume of an entire tissue block as shown in Figure 8f,g. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32815517-29915047-26997863 | 587-591 | 29915047 | denotes | 2018 |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32815517-29915047-26997863 | 587-591 | 29915047 | denotes | 2018 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
241 | 149-156 | Species | denotes | patient | Tax:9606 |