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PMC:7473770 / 25294-26048 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T169 217-228 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T170 274-291 Body_part denotes cell segmentation http://purl.org/sig/ont/fma/fma242660
T171 274-278 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T172 353-357 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T173 420-424 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T174 478-482 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T175 521-527 Body_part denotes radius http://purl.org/sig/ont/fma/fma23463
T176 539-543 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T177 621-626 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T178 717-723 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T158 717-723 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T238 26-34 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T239 100-101 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T240 162-163 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T241 274-278 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T242 353-357 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T243 373-374 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T244 387-388 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T245 420-424 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T246 445-446 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T247 478-482 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T248 498-499 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T249 539-543 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T250 587-591 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T251 621-626 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T252 683-684 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T25 35-44 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T26 279-291 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T192 0-207 Sentence denotes The severeness of hyaline membrane formation is case-specific, as the yellow rendering in Figure 8a,b,d demonstrates reduced amounts of deposits for patient I in a subvolume of parallel-beam reconstructions.
T193 208-320 Sentence denotes Further, lymphocytes (red) were identified based on the automated cell segmentation (see Materials and methods).
T194 321-449 Sentence denotes For clearer visualization, each cell is rendered as a sphere with a size corresponding to the mean cell volume in Figure 8a,b,d.
T195 450-646 Sentence denotes Based on convolution of the cell positions with a sphere of 100⁢μ⁢m in radius, the local cell density was calculated (Töpperwien et al., 2018) and presented as 3D-maps of cells/mm3 in Figure 8c,e.
T196 647-754 Sentence denotes This concept was then translated to a 3D-stitched volume of an entire tissue block as shown in Figure 8f,g.

2_test

Id Subject Object Predicate Lexical cue
32815517-29915047-26997863 587-591 29915047 denotes 2018

MyTest

Id Subject Object Predicate Lexical cue
32815517-29915047-26997863 587-591 29915047 denotes 2018

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
241 149-156 Species denotes patient Tax:9606