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PMC:7435837 / 45828-46830 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T294 157-165 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T295 205-212 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T296 265-269 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T297 385-389 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T298 492-496 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T299 606-621 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T300 616-621 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T301 659-672 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T302 659-663 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T303 678-693 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T304 688-693 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T305 715-724 Body_part denotes cytokines http://purl.org/sig/ont/fma/fma84050
T306 785-793 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T307 813-818 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T308 827-832 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T309 917-921 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T310 922-931 Body_part denotes lysosomes http://purl.org/sig/ont/fma/fma63836

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T422 63-68 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T423 94-95 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T424 109-110 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T425 132-133 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T426 140-145 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T427 244-245 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T428 248-249 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T429 265-269 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T430 321-329 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T431 348-353 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T432 385-389 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T433 402-410 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T434 455-460 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T435 492-496 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T436 556-561 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T437 582-587 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T438 606-621 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T439 659-663 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T440 664-672 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T441 678-693 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T442 694-699 http://purl.obolibrary.org/obo/CLO_0007225 denotes label
T443 704-709 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T444 725-728 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T445 730-733 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T446 794-801 http://purl.obolibrary.org/obo/CLO_0007225 denotes labeled
T447 802-807 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T448 811-818 http://purl.obolibrary.org/obo/CL_0000084 denotes T-cells
T449 820-826 http://purl.obolibrary.org/obo/CLO_0004265 denotes (H). T
T450 827-832 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T451 847-850 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T452 852-855 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T453 857-863 http://purl.obolibrary.org/obo/CLO_0007225 denotes labels
T454 884-889 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T455 915-921 http://purl.obolibrary.org/obo/CL_0000084 denotes T-cell
T456 922-931 http://purl.obolibrary.org/obo/GO_0005764 denotes lysosomes

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T554 157-165 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T555 180-188 Chemical denotes N-glycan http://purl.obolibrary.org/obo/CHEBI_59520
T556 205-212 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T557 694-699 Chemical denotes label http://purl.obolibrary.org/obo/CHEBI_35209

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T35 402-417 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion
T36 441-453 http://purl.obolibrary.org/obo/GO_0006909 denotes phagocytosis
T37 974-985 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1419 151-156 Gene denotes spike Gene:43740568
1420 180-188 Chemical denotes N-glycan
1421 279-285 Chemical denotes glycan MESH:D011134
1422 313-320 Chemical denotes bilipid
1423 354-360 Chemical denotes glycan MESH:D011134

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T353 0-79 Sentence denotes Figure 1 Two simplified routes of the fate of an encapsulated virus are shown.
T354 80-135 Sentence denotes Either route (A–D) or route (A–I) can be followed. (A).
T355 136-247 Sentence denotes The virus with spike proteins comprising of N-glycan moieties on the protein (red and green) is presented. (B).
T356 248-343 Sentence denotes A potential host cell presents glycan-recognizing lectins on its bilipid membrane surface. (C).
T357 344-486 Sentence denotes The virus glycan array binds to the host cell lectins and membrane fusion is initiated and after phagocytosis, virus replication follows. (D).
T358 487-577 Sentence denotes Host cell destruction takes place with the subsequent release of new virus particles. (E).
T359 578-673 Sentence denotes The virus is intercepted by dendritic cells before it can interact with the host cell membrane.
T360 674-824 Sentence denotes The dendritic cells label the virus with cytokines CD4+/CD8+ (green and orange symbols), and (G). presents the cytokine-labeled virus to T-cells. (H).
T361 825-937 Sentence denotes T-cells recognize the CD4+/CD8+ labels and phagocytose the virus that is destroyed in the T-cell lysosomes. (I).
T362 938-1002 Sentence denotes Only inactive, non-pathogenic viral degradation products remain.