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PMC:7402624 / 59616-60027 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T500 70-74 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T501 147-152 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T502 164-166 Body_part denotes PB http://purl.org/sig/ont/fma/fma84371
T503 288-293 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T504 314-318 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T505 348-350 Body_part denotes PB http://purl.org/sig/ont/fma/fma84371
T506 364-369 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1911 64-67 Gene denotes CD4 Gene:920
1912 141-144 Gene denotes CD8 Gene:925
1913 157-162 Gene denotes T-bet Gene:30009
1914 282-285 Gene denotes CD8 Gene:925
1915 308-311 Gene denotes CD4 Gene:920
1922 98-102 Chemical denotes cTfh

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T403 164-166 Disease denotes PB http://purl.obolibrary.org/obo/MONDO_0019035
T404 348-350 Disease denotes PB http://purl.obolibrary.org/obo/MONDO_0019035

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T905 64-67 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T906 68-74 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T907 75-85 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T908 141-144 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T909 145-152 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T910 282-285 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T911 286-293 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T912 308-311 http://purl.obolibrary.org/obo/PR_000001004 denotes CD4
T913 312-318 http://purl.obolibrary.org/obo/CL_0000084 denotes T cell
T914 319-329 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T915 362-369 http://purl.obolibrary.org/obo/CL_0000236 denotes B cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T14749 122-130 Chemical denotes effector http://purl.obolibrary.org/obo/CHEBI_35224
T88670 164-166 Chemical denotes PB http://purl.obolibrary.org/obo/CHEBI_53319|http://purl.obolibrary.org/obo/CHEBI_60686
T44023 273-281 Chemical denotes effector http://purl.obolibrary.org/obo/CHEBI_35224
T55913 348-350 Chemical denotes PB http://purl.obolibrary.org/obo/CHEBI_53319|http://purl.obolibrary.org/obo/CHEBI_60686

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T121 68-85 http://purl.obolibrary.org/obo/GO_0042110 denotes T cell activation
T122 70-85 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation
T123 312-329 http://purl.obolibrary.org/obo/GO_0042110 denotes T cell activation
T124 314-329 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation
T125 355-361 http://purl.obolibrary.org/obo/GO_0007613 denotes memory

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T347 0-411 Sentence denotes These analyses suggested that Immunotype 1, comprised of robust CD4 T cell activation, paucity of cTfh with proliferating effector/exhausted CD8 T cells and T-bet+ PB involvement, was connected to more severe disease whereas Immunotype 2, characterized by more traditional effector CD8 T cells subsets, less CD4 T cell activation and proliferating PB and memory B cells, was better captured by UMAP Component 2.