PMC:7402624 / 59616-60027
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T500 | 70-74 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T501 | 147-152 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T502 | 164-166 | Body_part | denotes | PB | http://purl.org/sig/ont/fma/fma84371 |
T503 | 288-293 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T504 | 314-318 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T505 | 348-350 | Body_part | denotes | PB | http://purl.org/sig/ont/fma/fma84371 |
T506 | 364-369 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1911 | 64-67 | Gene | denotes | CD4 | Gene:920 |
1912 | 141-144 | Gene | denotes | CD8 | Gene:925 |
1913 | 157-162 | Gene | denotes | T-bet | Gene:30009 |
1914 | 282-285 | Gene | denotes | CD8 | Gene:925 |
1915 | 308-311 | Gene | denotes | CD4 | Gene:920 |
1922 | 98-102 | Chemical | denotes | cTfh |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T403 | 164-166 | Disease | denotes | PB | http://purl.obolibrary.org/obo/MONDO_0019035 |
T404 | 348-350 | Disease | denotes | PB | http://purl.obolibrary.org/obo/MONDO_0019035 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T905 | 64-67 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
T906 | 68-74 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
T907 | 75-85 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
T908 | 141-144 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
T909 | 145-152 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
T910 | 282-285 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
T911 | 286-293 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
T912 | 308-311 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
T913 | 312-318 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
T914 | 319-329 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
T915 | 362-369 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B cells |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T14749 | 122-130 | Chemical | denotes | effector | http://purl.obolibrary.org/obo/CHEBI_35224 |
T88670 | 164-166 | Chemical | denotes | PB | http://purl.obolibrary.org/obo/CHEBI_53319|http://purl.obolibrary.org/obo/CHEBI_60686 |
T44023 | 273-281 | Chemical | denotes | effector | http://purl.obolibrary.org/obo/CHEBI_35224 |
T55913 | 348-350 | Chemical | denotes | PB | http://purl.obolibrary.org/obo/CHEBI_53319|http://purl.obolibrary.org/obo/CHEBI_60686 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T121 | 68-85 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T cell activation |
T122 | 70-85 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell activation |
T123 | 312-329 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T cell activation |
T124 | 314-329 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell activation |
T125 | 355-361 | http://purl.obolibrary.org/obo/GO_0007613 | denotes | memory |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T347 | 0-411 | Sentence | denotes | These analyses suggested that Immunotype 1, comprised of robust CD4 T cell activation, paucity of cTfh with proliferating effector/exhausted CD8 T cells and T-bet+ PB involvement, was connected to more severe disease whereas Immunotype 2, characterized by more traditional effector CD8 T cells subsets, less CD4 T cell activation and proliferating PB and memory B cells, was better captured by UMAP Component 2. |