PMC:7402624 / 1975-2608
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T8 | 0-12 | Body_part | denotes | compartments | http://purl.org/sig/ont/fma/fma76577 |
| T9 | 50-55 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T10 | 184-188 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T11 | 225-229 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T12 | 267-271 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T13 | 464-467 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T14 | 484-489 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T15 | 497-502 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T16 | 556-574 | Body_part | denotes | regulatory T cells | http://purl.org/sig/ont/fma/fma84070 |
| T17 | 569-574 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T18 | 590-595 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T19 | 606-610 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 497-502 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 63 | 178-181 | Gene | denotes | CD4 | Gene:920 |
| 64 | 261-264 | Gene | denotes | CD4 | Gene:920 |
| 65 | 452-456 | Gene | denotes | IL-6 | Gene:3569 |
| 66 | 461-467 | Gene | denotes | GM-CSF | Gene:1437 |
| 67 | 478-481 | Gene | denotes | CD4 | Gene:920 |
| 68 | 219-222 | Gene | denotes | CD8 | Gene:925 |
| 69 | 291-304 | Species | denotes | coronaviruses | Tax:11118 |
| 70 | 362-371 | Species | denotes | SARS-CoV2 | Tax:2697049 |
| 73 | 74-83 | Disease | denotes | infection | MESH:D007239 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T19 | 74-83 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T20 | 362-366 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17 | 50-55 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T18 | 163-168 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T19 | 178-181 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
| T20 | 182-188 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T21 | 204-209 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T22 | 219-222 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
| T23 | 223-229 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T24 | 261-264 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
| T25 | 265-271 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T26 | 323-324 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T27 | 478-481 | http://purl.obolibrary.org/obo/PR_000001004 | denotes | CD4 |
| T28 | 482-489 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
| T29 | 497-502 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T30 | 497-502 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
| T31 | 556-574 | http://purl.obolibrary.org/obo/CL_0000815 | denotes | regulatory T cells |
| T32 | 576-580 | http://purl.obolibrary.org/obo/CL_0000792 | denotes | Treg |
| T33 | 588-595 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
| T34 | 599-601 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T35 | 604-610 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 452-454 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
| T7 | 461-463 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12 | 87-99 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
| T13 | 386-408 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | Inflammatory responses |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18 | 116-385 | Sentence | denotes | Recovered subjects more often have evidence of virus-specific CD4 T cell responses than virus-specific CD8 T cell responses, though pre-existing CD4 T cell responses to other coronaviruses also are found in a subset of subjects in the absence of SARS-CoV2 exposure (6). |
| T19 | 386-603 | Sentence | denotes | Inflammatory responses have been reported, including increases in IL-6- or GM-CSF-producing CD4 T cells in the blood (7) or decreases in immunoregulatory subsets such as regulatory T cells (Treg) or ɣδ T cells (8–11). |