PMC:7376845 / 8883-9946 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7376845","sourcedb":"PMC","sourceid":"7376845","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7376845","text":"Transient transfection and immunofluorescence analysis\nFor immunofluorescence (IF) analysis, COS-7 cells on glass coverslips were transfected as above and fixed at 24 hours post-transfection in 4% paraformaldehyde for 10 min at RT followed by permeabilisation with 0.2% Triton X-100 (Sigma-Aldrich, St. Louis, MO, United States) for 5 min. Fixed cells were then blocked with PBS containing 10% FBS for 30 min at RT. Cells were immunolabelled for 1 hour at RT with the indicated murine mAb and 45 min with Alexa Fluor 488-conjugated goat anti-mouse IgG antibody (Life Technologies, Carlsbad, CA, United States). Immunolabelled coverslips were counterstained with 4′,6-diamidino-2-phenylindole (DAPI; Sigma-Aldrich), and mounted using ProLong Gold Antifade Mountant (Molecular Probes, Eugene, OR, United States). Images were acquired with Olympus CKX53 microscope using Olympus (Tokyo, Japan) LCAch N 20×/0.40 iPC objective lens and Olympus DP27 colour camera with Olympus cellSens software. Each channel was collected separately, with images at 1024 × 1024 pixels.","divisions":[{"label":"title","span":{"begin":0,"end":54}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T61","span":{"begin":99,"end":104},"obj":"Body_part"},{"id":"T62","span":{"begin":346,"end":351},"obj":"Body_part"},{"id":"T63","span":{"begin":416,"end":421},"obj":"Body_part"},{"id":"T64","span":{"begin":548,"end":551},"obj":"Body_part"},{"id":"T65","span":{"begin":552,"end":560},"obj":"Body_part"},{"id":"T66","span":{"begin":922,"end":926},"obj":"Body_part"}],"attributes":[{"id":"A61","pred":"fma_id","subj":"T61","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A62","pred":"fma_id","subj":"T62","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A63","pred":"fma_id","subj":"T63","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A64","pred":"fma_id","subj":"T64","obj":"http://purl.org/sig/ont/fma/fma62872"},{"id":"A65","pred":"fma_id","subj":"T65","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A66","pred":"fma_id","subj":"T66","obj":"http://purl.org/sig/ont/fma/fma58241"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T66","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"256","span":{"begin":478,"end":484},"obj":"Species"},{"id":"257","span":{"begin":197,"end":213},"obj":"Chemical"},{"id":"258","span":{"begin":270,"end":282},"obj":"Chemical"},{"id":"259","span":{"begin":375,"end":378},"obj":"Chemical"},{"id":"260","span":{"begin":505,"end":520},"obj":"Chemical"},{"id":"261","span":{"begin":662,"end":691},"obj":"Chemical"},{"id":"262","span":{"begin":693,"end":697},"obj":"Chemical"},{"id":"263","span":{"begin":93,"end":98},"obj":"CellLine"}],"attributes":[{"id":"A256","pred":"tao:has_database_id","subj":"256","obj":"Tax:10090"},{"id":"A257","pred":"tao:has_database_id","subj":"257","obj":"MESH:C003043"},{"id":"A258","pred":"tao:has_database_id","subj":"258","obj":"MESH:D017830"},{"id":"A261","pred":"tao:has_database_id","subj":"261","obj":"MESH:C007293"},{"id":"A262","pred":"tao:has_database_id","subj":"262","obj":"MESH:C007293"},{"id":"A263","pred":"tao:has_database_id","subj":"263","obj":"CVCL:0224"},{"subj":"256","pred":"source","obj":"LitCovid-PubTator"},{"subj":"257","pred":"source","obj":"LitCovid-PubTator"},{"subj":"258","pred":"source","obj":"LitCovid-PubTator"},{"subj":"259","pred":"source","obj":"LitCovid-PubTator"},{"subj":"260","pred":"source","obj":"LitCovid-PubTator"},{"subj":"261","pred":"source","obj":"LitCovid-PubTator"},{"subj":"262","pred":"source","obj":"LitCovid-PubTator"},{"subj":"263","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T108","span":{"begin":93,"end":104},"obj":"http://purl.obolibrary.org/obo/CLO_0051656"},{"id":"T109","span":{"begin":93,"end":104},"obj":"http://purl.obolibrary.org/obo/CLO_0051657"},{"id":"T110","span":{"begin":93,"end":104},"obj":"http://purl.obolibrary.org/obo/CLO_0051658"},{"id":"T111","span":{"begin":93,"end":98},"obj":"http://purl.obolibrary.org/obo/CLO_0002597"},{"id":"T112","span":{"begin":93,"end":98},"obj":"http://purl.obolibrary.org/obo/CLO_0050508"},{"id":"T113","span":{"begin":299,"end":301},"obj":"http://purl.obolibrary.org/obo/CLO_0009141"},{"id":"T114","span":{"begin":299,"end":301},"obj":"http://purl.obolibrary.org/obo/CLO_0050980"},{"id":"T115","span":{"begin":310,"end":312},"obj":"http://purl.obolibrary.org/obo/CLO_0007815"},{"id":"T116","span":{"begin":346,"end":351},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T117","span":{"begin":416,"end":421},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T118","span":{"begin":493,"end":495},"obj":"http://purl.obolibrary.org/obo/CLO_0053799"},{"id":"T119","span":{"begin":532,"end":536},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9925"},{"id":"T120","span":{"begin":542,"end":547},"obj":"http://purl.obolibrary.org/obo/CLO_0007836"},{"id":"T121","span":{"begin":908,"end":911},"obj":"http://purl.obolibrary.org/obo/CL_0000784"},{"id":"T122","span":{"begin":912,"end":921},"obj":"http://purl.obolibrary.org/obo/BFO_0000030"},{"id":"T123","span":{"begin":922,"end":926},"obj":"http://purl.obolibrary.org/obo/UBERON_0005389"}],"attributes":[{"subj":"T108","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T109","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T110","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T111","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T112","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T113","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T114","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T115","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T116","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T117","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T118","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T119","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T120","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T121","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T122","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T123","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T93","span":{"begin":270,"end":282},"obj":"Chemical"},{"id":"T94","span":{"begin":505,"end":520},"obj":"Chemical"},{"id":"T95","span":{"begin":511,"end":516},"obj":"Chemical"},{"id":"T96","span":{"begin":679,"end":691},"obj":"Chemical"},{"id":"T97","span":{"begin":693,"end":697},"obj":"Chemical"},{"id":"T98","span":{"begin":741,"end":745},"obj":"Chemical"}],"attributes":[{"id":"A93","pred":"chebi_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/CHEBI_9750"},{"id":"A94","pred":"chebi_id","subj":"T94","obj":"http://purl.obolibrary.org/obo/CHEBI_52661"},{"id":"A95","pred":"chebi_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/CHEBI_24061"},{"id":"A96","pred":"chebi_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/CHEBI_48559"},{"id":"A97","pred":"chebi_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/CHEBI_51231"},{"id":"A98","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_29287"},{"subj":"T93","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T94","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T95","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T96","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T97","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T98","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T64","span":{"begin":0,"end":54},"obj":"Sentence"},{"id":"T65","span":{"begin":55,"end":339},"obj":"Sentence"},{"id":"T66","span":{"begin":340,"end":415},"obj":"Sentence"},{"id":"T67","span":{"begin":416,"end":610},"obj":"Sentence"},{"id":"T68","span":{"begin":611,"end":810},"obj":"Sentence"},{"id":"T69","span":{"begin":811,"end":989},"obj":"Sentence"},{"id":"T70","span":{"begin":990,"end":1063},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T64","pred":"source","obj":"LitCovid-sentences"},{"subj":"T65","pred":"source","obj":"LitCovid-sentences"},{"subj":"T66","pred":"source","obj":"LitCovid-sentences"},{"subj":"T67","pred":"source","obj":"LitCovid-sentences"},{"subj":"T68","pred":"source","obj":"LitCovid-sentences"},{"subj":"T69","pred":"source","obj":"LitCovid-sentences"},{"subj":"T70","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#a093ec","default":true},{"id":"LitCovid-PubTator","color":"#9fec93"},{"id":"LitCovid-PD-CLO","color":"#ec93b9"},{"id":"LitCovid-PD-CHEBI","color":"#93d3ec"},{"id":"LitCovid-sentences","color":"#eceb93"}]}]}}