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PMC:7358770 / 3539-4103 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T21 11-18 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T22 197-199 Body_part denotes CS http://purl.org/sig/ont/fma/fma284995|http://purl.org/sig/ont/fma/fma82837
T24 337-348 Body_part denotes cytoplasmic http://purl.org/sig/ont/fma/fma66835

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 349-353 Body_part denotes tail http://purl.obolibrary.org/obo/UBERON_0002415

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
106 496-500 Gene denotes ACE2 Gene:59272
109 396-399 Species denotes MHV Tax:11138

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T21 465-469 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T32 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T33 34-35 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 217-224 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T35 319-327 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T36 349-353 http://purl.obolibrary.org/obo/UBERON_0002415 denotes tail

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T35 11-18 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T36 197-199 Chemical denotes CS http://purl.obolibrary.org/obo/CHEBI_73462|http://purl.obolibrary.org/obo/CHEBI_37397
T38 217-224 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T39 226-228 Chemical denotes FP http://purl.obolibrary.org/obo/CHEBI_74750
T40 303-305 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861

2_test

Id Subject Object Predicate Lexical cue
32679328-22590686-48281227 561-562 22590686 denotes 7
T7810 561-562 22590686 denotes 7

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T28 0-564 Sentence denotes A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7].

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T105 9-18 PG_1 denotes S protein
T106 136-142 SO:0000417 denotes domain
T107 181-189 MOP:0000780 denotes cleavage
T108 283-296 GO:0016020 denotes transmembrane
T109 319-327 GO:0016020 denotes membrane
T110 337-348 GO:0005737 denotes cytoplasmic
T111 396-399 NCBITaxon:11757 denotes MHV
T112 409-416 GO:1990524 denotes complex
T113 465-469 SP_10 denotes SARS
T114 479-486 GO:1990524 denotes complex
T115 496-500 G_3;PG_10;PR:000003622 denotes ACE2
T116 545-548 PR:000005225 denotes HR1
T24360 22-34 NCBITaxon:11118 denotes depicted as
T90324 35-50 CHEBI:18154;CHEBI:18154 denotes rectangle, and
T46400 70-79 CHEBI:36357;CHEBI:36357 denotes features
T99254 101-107 NCBITaxon:3193 denotes llows:
T58294 125-132 NCBITaxon:33208 denotes or bind
T73413 167-182 CHEBI:18154;CHEBI:18154 denotes RBD in brown; c
T91919 312-325 NCBITaxon:11118 denotes ted as membra
T80071 335-343 SP_10 denotes ; cytopl
T49849 345-353 SP_9 denotes mic tail
T17447 365-375 SP_7 denotes ht blue.;
T14527 426-432 NCBITaxon:9606 denotes CEACAM
T13349 437-444 NCBITaxon:33208 denotes ptor.;
T87933 483-493 CHEBI:35222;CHEBI:35222 denotes lex with i
T91737 500-515 CHEBI:18154;CHEBI:18154 denotes receptor.; (E)

MyTest

Id Subject Object Predicate Lexical cue tao:has_database_id
106 496-500 Gene denotes ACE2 Gene:59272
109 396-399 Species denotes MHV Tax:11138