PMC:7358770 / 3539-4103 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T21","span":{"begin":11,"end":18},"obj":"Body_part"},{"id":"T22","span":{"begin":197,"end":199},"obj":"Body_part"},{"id":"T24","span":{"begin":337,"end":348},"obj":"Body_part"}],"attributes":[{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma284995"},{"id":"A23","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma82837"},{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma66835"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T1","span":{"begin":349,"end":353},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0002415"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-PubTator","denotations":[{"id":"106","span":{"begin":496,"end":500},"obj":"Gene"},{"id":"109","span":{"begin":396,"end":399},"obj":"Species"}],"attributes":[{"id":"A106","pred":"tao:has_database_id","subj":"106","obj":"Gene:59272"},{"id":"A109","pred":"tao:has_database_id","subj":"109","obj":"Tax:11138"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T21","span":{"begin":465,"end":469},"obj":"Disease"}],"attributes":[{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T32","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T33","span":{"begin":34,"end":35},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T34","span":{"begin":217,"end":224},"obj":"http://purl.obolibrary.org/obo/PR_000018263"},{"id":"T35","span":{"begin":319,"end":327},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"},{"id":"T36","span":{"begin":349,"end":353},"obj":"http://purl.obolibrary.org/obo/UBERON_0002415"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T35","span":{"begin":11,"end":18},"obj":"Chemical"},{"id":"T36","span":{"begin":197,"end":199},"obj":"Chemical"},{"id":"T38","span":{"begin":217,"end":224},"obj":"Chemical"},{"id":"T39","span":{"begin":226,"end":228},"obj":"Chemical"},{"id":"T40","span":{"begin":303,"end":305},"obj":"Chemical"}],"attributes":[{"id":"A35","pred":"chebi_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A36","pred":"chebi_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/CHEBI_73462"},{"id":"A37","pred":"chebi_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/CHEBI_37397"},{"id":"A38","pred":"chebi_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"},{"id":"A39","pred":"chebi_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/CHEBI_74750"},{"id":"A40","pred":"chebi_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/CHEBI_55460"},{"id":"A41","pred":"chebi_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/CHEBI_74861"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"2_test","denotations":[{"id":"32679328-22590686-48281227","span":{"begin":561,"end":562},"obj":"22590686"},{"id":"T7810","span":{"begin":561,"end":562},"obj":"22590686"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-sentences","denotations":[{"id":"T28","span":{"begin":0,"end":564},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T105","span":{"begin":9,"end":18},"obj":"PG_1"},{"id":"T106","span":{"begin":136,"end":142},"obj":"SO:0000417"},{"id":"T107","span":{"begin":181,"end":189},"obj":"MOP:0000780"},{"id":"T108","span":{"begin":283,"end":296},"obj":"GO:0016020"},{"id":"T109","span":{"begin":319,"end":327},"obj":"GO:0016020"},{"id":"T110","span":{"begin":337,"end":348},"obj":"GO:0005737"},{"id":"T111","span":{"begin":396,"end":399},"obj":"NCBITaxon:11757"},{"id":"T112","span":{"begin":409,"end":416},"obj":"GO:1990524"},{"id":"T113","span":{"begin":465,"end":469},"obj":"SP_10"},{"id":"T114","span":{"begin":479,"end":486},"obj":"GO:1990524"},{"id":"T115","span":{"begin":496,"end":500},"obj":"G_3;PG_10;PR:000003622"},{"id":"T116","span":{"begin":545,"end":548},"obj":"PR:000005225"},{"id":"T24360","span":{"begin":22,"end":34},"obj":"NCBITaxon:11118"},{"id":"T90324","span":{"begin":35,"end":50},"obj":"CHEBI:18154;CHEBI:18154"},{"id":"T46400","span":{"begin":70,"end":79},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T99254","span":{"begin":101,"end":107},"obj":"NCBITaxon:3193"},{"id":"T58294","span":{"begin":125,"end":132},"obj":"NCBITaxon:33208"},{"id":"T73413","span":{"begin":167,"end":182},"obj":"CHEBI:18154;CHEBI:18154"},{"id":"T91919","span":{"begin":312,"end":325},"obj":"NCBITaxon:11118"},{"id":"T80071","span":{"begin":335,"end":343},"obj":"SP_10"},{"id":"T49849","span":{"begin":345,"end":353},"obj":"SP_9"},{"id":"T17447","span":{"begin":365,"end":375},"obj":"SP_7"},{"id":"T14527","span":{"begin":426,"end":432},"obj":"NCBITaxon:9606"},{"id":"T13349","span":{"begin":437,"end":444},"obj":"NCBITaxon:33208"},{"id":"T87933","span":{"begin":483,"end":493},"obj":"CHEBI:35222;CHEBI:35222"},{"id":"T91737","span":{"begin":500,"end":515},"obj":"CHEBI:18154;CHEBI:18154"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}

{"project":"MyTest","denotations":[{"id":"106","span":{"begin":496,"end":500},"obj":"Gene"},{"id":"109","span":{"begin":396,"end":399},"obj":"Species"}],"attributes":[{"id":"A106","pred":"tao:has_database_id","subj":"106","obj":"Gene:59272"},{"id":"A109","pred":"tao:has_database_id","subj":"109","obj":"Tax:11138"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"A single S protein is depicted as a rectangle, and relevant structural features are highlighted as follows: N-terminal receptor binding domain (N-RBD) in dark blue; C-RBD in brown; cleavage sites (CS) 1 and 2, fusion peptide (FP) in red, heptad repeat (HR) regions 1 and 2 in green; transmembrane span (TM) depicted as membrane bilayer; cytoplasmic tail (CT) in light blue.; (C) Structure of the MHV N-RBD in complex with its CEACAM receptor.; (D) Structure of the SARS C-RBD in complex with its ACE2 receptor.; (E) Structure of the post-fusion HR1-HR2 bundle [7]."}