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PMC:7352545 / 53978-55058 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T190 460-462 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA
T191 1030-1032 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA
T192 1053-1055 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T463 99-103 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T464 211-223 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T465 266-278 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T466 292-303 Body_part denotes cytoplasmic http://purl.org/sig/ont/fma/fma66835
T467 387-394 Body_part denotes proline http://purl.org/sig/ont/fma/fma82761
T468 436-448 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T469 693-705 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T470 833-845 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T471 908-924 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T472 919-924 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T473 939-943 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T474 944-969 Body_part denotes alveolar epithelial cells http://purl.org/sig/ont/fma/fma62499
T475 964-969 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T26 304-308 Body_part denotes tail http://purl.obolibrary.org/obo/UBERON_0002415
T27 939-943 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T749 27-32 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T750 51-52 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T751 92-93 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T752 99-103 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T753 246-247 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T754 284-285 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T755 304-308 http://purl.obolibrary.org/obo/UBERON_0002415 denotes tail
T756 352-353 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T757 547-549 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T758 616-618 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T759 616-618 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T760 720-721 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T761 743-745 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T762 750-752 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T763 750-752 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T764 789-791 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T765 789-791 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T766 811-813 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T767 811-813 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T768 884-889 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camel
T769 908-918 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T770 919-924 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T771 933-938 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T772 939-943 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T773 939-943 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T774 953-963 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T775 964-969 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T90351 4-7 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T82 21-24 Chemical denotes DPP http://purl.obolibrary.org/obo/CHEBI_34680|http://purl.obolibrary.org/obo/CHEBI_60069
T84 58-60 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T22427 61-63 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T57434 211-223 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T89040 260-262 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T89 263-265 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T91 266-278 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T92 387-394 Chemical denotes proline http://purl.obolibrary.org/obo/CHEBI_17203|http://purl.obolibrary.org/obo/CHEBI_26271
T94 395-405 Chemical denotes dipeptides http://purl.obolibrary.org/obo/CHEBI_46761
T24076 436-448 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T96 460-462 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T101 616-618 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T20492 669-671 Chemical denotes PM http://purl.obolibrary.org/obo/CHEBI_141444|http://purl.obolibrary.org/obo/CHEBI_16410|http://purl.obolibrary.org/obo/CHEBI_53551
T105 693-705 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T106 750-752 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T107 789-791 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T69256 811-813 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T51531 833-845 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T14157 1030-1032 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T8117 1037-1049 Chemical denotes acetyl group http://purl.obolibrary.org/obo/CHEBI_40574
T86701 1037-1043 Chemical denotes acetyl http://purl.obolibrary.org/obo/CHEBI_46887
T82881 1044-1049 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T24700 1053-1055 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T123 1060-1068 Chemical denotes glycolyl http://purl.obolibrary.org/obo/CHEBI_30884
T124 1069-1074 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T520 0-43 Sentence denotes The Ser exopeptidase DPP-4/human CD26 (PDB:
T521 44-126 Sentence denotes 4L72), a type II TM ectopeptidase, functions as a host cell receptor for MERS-CoV.
T522 127-237 Sentence denotes The RBD structure was characterized by crystallography approaches of the MERS-CoV S glycoprotein–DPP4 complex.
T523 238-371 Sentence denotes DPP4 is a single type II TM glycoprotein with a small cytoplasmic tail in the N-terminal region and is present as a homodimeric form.
T524 372-433 Sentence denotes DPP4 cleaves X-proline dipeptides from the N-terminal region.
T525 434-533 Sentence denotes S glycoprotein recognizes SA species and DPP44 as the attachment and entry receptors, respectively.
T526 534-611 Sentence denotes The MERS-CoV S1 N-terminal domain attaches to DPP4 as the host receptor [81].
T527 612-681 Sentence denotes The S2 C-terminal domain of MERS-CoV anchors to cellular PM to enter.
T528 682-766 Sentence denotes MERS-CoV S glycoprotein is cleaved at a sequence between the S1 and S2 domains [96].
T529 767-821 Sentence denotes Another cleavage site S2′ is present in the S2 domain.
T530 822-990 Sentence denotes MERS CoV S glycoprotein sialyl receptors are expressed in the camel nasal respiratory epithelial cells and the human lung alveolar epithelial cells, which express DPP4.
T531 991-1080 Sentence denotes Binding capacities are hindered by the SA 9-O-acetyl group or SA 5-N-glycolyl group [75].

2_test

Id Subject Object Predicate Lexical cue
32604730-23486063-51944059 607-609 23486063 denotes 81
32604730-27791014-51944060 762-764 27791014 denotes 96
32604730-28923942-51944061 1076-1078 28923942 denotes 75
T57405 607-609 23486063 denotes 81
T40903 762-764 27791014 denotes 96
T18110 1076-1078 28923942 denotes 75