PMC:7344504 / 13300-14158
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
354 | 254-262 | Species | denotes | patients | Tax:9606 |
355 | 565-572 | Species | denotes | patient | Tax:9606 |
356 | 836-844 | Species | denotes | patients | Tax:9606 |
357 | 170-183 | Chemical | denotes | galactomannan | MESH:C012990 |
358 | 193-203 | Chemical | denotes | β-d-glucan | |
359 | 368-381 | Chemical | denotes | galactomannan | MESH:C012990 |
360 | 658-671 | Chemical | denotes | galactomannan | MESH:C012990 |
361 | 821-835 | Disease | denotes | critically ill | MESH:D016638 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T96 | 84-87 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T97 | 101-102 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T98 | 185-187 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
T99 | 318-319 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T100 | 382-389 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
T101 | 427-428 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T102 | 463-466 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T103 | 535-541 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | device |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T104 | 4-7 | Chemical | denotes | LFD | http://purl.obolibrary.org/obo/CHEBI_73571 |
T105 | 147-150 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
T106 | 170-183 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
T107 | 197-203 | Chemical | denotes | glucan | http://purl.obolibrary.org/obo/CHEBI_37163 |
T108 | 212-215 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
T110 | 293-296 | Chemical | denotes | LFD | http://purl.obolibrary.org/obo/CHEBI_73571 |
T111 | 368-381 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
T112 | 393-396 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
T113 | 658-671 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
LitCovid-PD-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
---|---|---|---|---|---|
T6 | 170-183 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
T7 | 368-381 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
T8 | 658-671 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T103 | 0-80 | Sentence | denotes | The LFD is particularly interesting in the ICU due to its short turnaround time. |
T104 | 81-263 | Sentence | denotes | It has demonstrated a higher sensitivity but lower specificity in BAL fluids compared to galactomannan [36] and β-d-glucan [37] in IPA-probable and proven immunocompromised patients. |
T105 | 264-412 | Sentence | denotes | In the ICU setting, however, LFD is suggested to have a lower sensitivity but comparable specificity to galactomannan testing in BAL fluids [35,38]. |
T106 | 413-505 | Sentence | denotes | Noteworthily, a negative predictive value of >96% has been reported in the ICU setting [39]. |
T107 | 506-679 | Sentence | denotes | We used the OLM lateral flow device (AspLFD) on sequential patient tracheal aspirates, yielding positive results on all samples confirming the positive galactomannan result. |
T108 | 680-858 | Sentence | denotes | Although suitable for its negative predictive value or as an additional diagnostic measure, further evaluation of lateral flow technology in critically ill patients is warranted. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T21 | 212-215 | Phenotype | denotes | IPA | http://purl.obolibrary.org/obo/HP_0020103 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32517166-25903568-60114412 | 185-187 | 25903568 | denotes | 36 |
32517166-24671798-60114413 | 205-207 | 24671798 | denotes | 37 |
32517166-30565352-60114414 | 408-410 | 30565352 | denotes | 38 |
32517166-25927915-60114415 | 501-503 | 25927915 | denotes | 39 |