PMC:7335631 / 7478-8572 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T87","span":{"begin":42,"end":49},"obj":"Body_part"},{"id":"T88","span":{"begin":64,"end":71},"obj":"Body_part"}],"attributes":[{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T52","span":{"begin":53,"end":57},"obj":"Disease"},{"id":"T53","span":{"begin":206,"end":209},"obj":"Disease"},{"id":"T56","span":{"begin":263,"end":266},"obj":"Disease"},{"id":"T59","span":{"begin":323,"end":326},"obj":"Disease"},{"id":"T62","span":{"begin":1068,"end":1071},"obj":"Disease"}],"attributes":[{"id":"A52","pred":"mondo_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A53","pred":"mondo_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/MONDO_0005473"},{"id":"A54","pred":"mondo_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/MONDO_0008040"},{"id":"A55","pred":"mondo_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/MONDO_0010870"},{"id":"A56","pred":"mondo_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/MONDO_0005473"},{"id":"A57","pred":"mondo_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/MONDO_0008040"},{"id":"A58","pred":"mondo_id","subj":"T56","obj":"http://purl.obolibrary.org/obo/MONDO_0010870"},{"id":"A59","pred":"mondo_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/MONDO_0005473"},{"id":"A60","pred":"mondo_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/MONDO_0008040"},{"id":"A61","pred":"mondo_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/MONDO_0010870"},{"id":"A62","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0005473"},{"id":"A63","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0008040"},{"id":"A64","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0010870"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T34","span":{"begin":1066,"end":1067},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T106","span":{"begin":42,"end":49},"obj":"Chemical"},{"id":"T107","span":{"begin":64,"end":71},"obj":"Chemical"},{"id":"T108","span":{"begin":72,"end":74},"obj":"Chemical"},{"id":"T109","span":{"begin":116,"end":121},"obj":"Chemical"},{"id":"T110","span":{"begin":136,"end":138},"obj":"Chemical"},{"id":"T111","span":{"begin":198,"end":200},"obj":"Chemical"},{"id":"T113","span":{"begin":740,"end":742},"obj":"Chemical"}],"attributes":[{"id":"A106","pred":"chebi_id","subj":"T106","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A107","pred":"chebi_id","subj":"T107","obj":"http://purl.obolibrary.org/obo/CHEBI_16541"},{"id":"A108","pred":"chebi_id","subj":"T108","obj":"http://purl.obolibrary.org/obo/CHEBI_141439"},{"id":"A109","pred":"chebi_id","subj":"T109","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A110","pred":"chebi_id","subj":"T110","obj":"http://purl.obolibrary.org/obo/CHEBI_75008"},{"id":"A111","pred":"chebi_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/CHEBI_17351"},{"id":"A112","pred":"chebi_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/CHEBI_73527"},{"id":"A113","pred":"chebi_id","subj":"T113","obj":"http://purl.obolibrary.org/obo/CHEBI_73710"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T7","span":{"begin":206,"end":209},"obj":"Phenotype"},{"id":"T8","span":{"begin":263,"end":266},"obj":"Phenotype"},{"id":"T9","span":{"begin":323,"end":326},"obj":"Phenotype"},{"id":"T10","span":{"begin":1068,"end":1071},"obj":"Phenotype"}],"attributes":[{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0005534"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/HP_0005534"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/HP_0005534"},{"id":"A10","pred":"hp_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/HP_0005534"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}

{"project":"LitCovid-sentences","denotations":[{"id":"T59","span":{"begin":0,"end":63},"obj":"Sentence"},{"id":"T60","span":{"begin":64,"end":121},"obj":"Sentence"},{"id":"T61","span":{"begin":122,"end":175},"obj":"Sentence"},{"id":"T62","span":{"begin":176,"end":236},"obj":"Sentence"},{"id":"T63","span":{"begin":237,"end":293},"obj":"Sentence"},{"id":"T64","span":{"begin":294,"end":310},"obj":"Sentence"},{"id":"T65","span":{"begin":311,"end":353},"obj":"Sentence"},{"id":"T66","span":{"begin":354,"end":373},"obj":"Sentence"},{"id":"T67","span":{"begin":374,"end":425},"obj":"Sentence"},{"id":"T68","span":{"begin":426,"end":485},"obj":"Sentence"},{"id":"T69","span":{"begin":486,"end":545},"obj":"Sentence"},{"id":"T70","span":{"begin":546,"end":605},"obj":"Sentence"},{"id":"T71","span":{"begin":606,"end":665},"obj":"Sentence"},{"id":"T72","span":{"begin":666,"end":725},"obj":"Sentence"},{"id":"T73","span":{"begin":726,"end":785},"obj":"Sentence"},{"id":"T74","span":{"begin":786,"end":799},"obj":"Sentence"},{"id":"T75","span":{"begin":800,"end":856},"obj":"Sentence"},{"id":"T76","span":{"begin":857,"end":870},"obj":"Sentence"},{"id":"T77","span":{"begin":871,"end":927},"obj":"Sentence"},{"id":"T78","span":{"begin":928,"end":943},"obj":"Sentence"},{"id":"T79","span":{"begin":944,"end":996},"obj":"Sentence"},{"id":"T80","span":{"begin":997,"end":1012},"obj":"Sentence"},{"id":"T81","span":{"begin":1013,"end":1065},"obj":"Sentence"},{"id":"T82","span":{"begin":1066,"end":1094},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T172","span":{"begin":40,"end":49},"obj":"PG_2"},{"id":"T173","span":{"begin":53,"end":62},"obj":"SP_7"},{"id":"T174","span":{"begin":1073,"end":1086},"obj":"GO:0016020"},{"id":"T175","span":{"begin":1087,"end":1093},"obj":"SO:0000417"},{"id":"T33","span":{"begin":1073,"end":1086},"obj":"GO:0016020"},{"id":"T34","span":{"begin":1087,"end":1093},"obj":"SO:0000417"},{"id":"T160","span":{"begin":12,"end":17},"obj":"NCBITaxon:10239"},{"id":"T161","span":{"begin":51,"end":54},"obj":"CHEBI:24870;CHEBI:24870"},{"id":"T162","span":{"begin":79,"end":87},"obj":"GO:0031975"},{"id":"T163","span":{"begin":351,"end":356},"obj":"PR:000010546"},{"id":"T164","span":{"begin":360,"end":365},"obj":"GO:0005794"},{"id":"T165","span":{"begin":423,"end":434},"obj":"GO:0006260"},{"id":"T166","span":{"begin":462,"end":467},"obj":"NCBITaxon:10239"},{"id":"T167","span":{"begin":493,"end":499},"obj":"SO:0000417"},{"id":"T168","span":{"begin":507,"end":517},"obj":"PG_2"},{"id":"T169","span":{"begin":521,"end":530},"obj":"SP_7"},{"id":"T170","span":{"begin":775,"end":780},"obj":"CHEBI:24433;CHEBI:24433"},{"id":"T171","span":{"begin":883,"end":888},"obj":"CHEBI:24433;CHEBI:24433"},{"id":"T40836","span":{"begin":1040,"end":1051},"obj":"PG_2"},{"id":"T95722","span":{"begin":1055,"end":1064},"obj":"SP_7"},{"id":"T91530","span":{"begin":1073,"end":1086},"obj":"GO:0016020"},{"id":"T22228","span":{"begin":1087,"end":1093},"obj":"SO:0000417"}],"text":"Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2.\nProtein-ID Geo-location Mutation Domain Change of R-group\nQJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic\nQJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic\nQHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic\nQJS53352 Greece: Athens L39M TMD Hydrophobic to Hydrophobic\nQJR88103 Australia: Victoria L73F C-terminus Hydrophobic to Hydrophobic\nQKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic\nQIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic\nQKG87268 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKG88576 USA: Massachusetts S68F C-terminus Hydrophobic to Hydrophobic\nQKI36831 China: Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic\nQKI36855 China: Guangzhou S68C C-terminus Hydrophilic to Hydrophobic\na TMD: transmembrane domain."}