PMC:7335631 / 7478-8572
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T87 | 42-49 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T88 | 64-71 | Body_part | denotes | Protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T52 | 53-57 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T53 | 206-209 | Disease | denotes | TMD | http://purl.obolibrary.org/obo/MONDO_0005473|http://purl.obolibrary.org/obo/MONDO_0008040|http://purl.obolibrary.org/obo/MONDO_0010870 |
| T56 | 263-266 | Disease | denotes | TMD | http://purl.obolibrary.org/obo/MONDO_0005473|http://purl.obolibrary.org/obo/MONDO_0008040|http://purl.obolibrary.org/obo/MONDO_0010870 |
| T59 | 323-326 | Disease | denotes | TMD | http://purl.obolibrary.org/obo/MONDO_0005473|http://purl.obolibrary.org/obo/MONDO_0008040|http://purl.obolibrary.org/obo/MONDO_0010870 |
| T62 | 1068-1071 | Disease | denotes | TMD | http://purl.obolibrary.org/obo/MONDO_0005473|http://purl.obolibrary.org/obo/MONDO_0008040|http://purl.obolibrary.org/obo/MONDO_0010870 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T34 | 1066-1067 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T106 | 42-49 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T107 | 64-71 | Chemical | denotes | Protein | http://purl.obolibrary.org/obo/CHEBI_16541 |
| T108 | 72-74 | Chemical | denotes | ID | http://purl.obolibrary.org/obo/CHEBI_141439 |
| T109 | 116-121 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
| T110 | 136-138 | Chemical | denotes | VA | http://purl.obolibrary.org/obo/CHEBI_75008 |
| T111 | 198-200 | Chemical | denotes | LA | http://purl.obolibrary.org/obo/CHEBI_17351|http://purl.obolibrary.org/obo/CHEBI_73527 |
| T113 | 740-742 | Chemical | denotes | WA | http://purl.obolibrary.org/obo/CHEBI_73710 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T7 | 206-209 | Phenotype | denotes | TMD | http://purl.obolibrary.org/obo/HP_0005534 |
| T8 | 263-266 | Phenotype | denotes | TMD | http://purl.obolibrary.org/obo/HP_0005534 |
| T9 | 323-326 | Phenotype | denotes | TMD | http://purl.obolibrary.org/obo/HP_0005534 |
| T10 | 1068-1071 | Phenotype | denotes | TMD | http://purl.obolibrary.org/obo/HP_0005534 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T59 | 0-63 | Sentence | denotes | Table 1 Non- synonymous mutation in the E-protein of SARS-CoV2. |
| T60 | 64-121 | Sentence | denotes | Protein-ID Geo-location Mutation Domain Change of R-group |
| T61 | 122-175 | Sentence | denotes | QJA42107 USA: VA A36V TMDa Hydrophobic to Hydrophobic |
| T62 | 176-236 | Sentence | denotes | QJQ84222 USA: KENNER, LA L26F TMD Hydrophobic to Hydrophobic |
| T63 | 237-293 | Sentence | denotes | QHZ00381 South Korea L37H TMD Hydrophobic to Hydrophilic |
| T64 | 294-310 | Sentence | denotes | QJS53352 Greece: |
| T65 | 311-353 | Sentence | denotes | Athens L39M TMD Hydrophobic to Hydrophobic |
| T66 | 354-373 | Sentence | denotes | QJR88103 Australia: |
| T67 | 374-425 | Sentence | denotes | Victoria L73F C-terminus Hydrophobic to Hydrophobic |
| T68 | 426-485 | Sentence | denotes | QKE45838 USA: CA P71L C-terminus Hydrophobic to Hydrophobic |
| T69 | 486-545 | Sentence | denotes | QKE45886 USA: CA P71L C-terminus Hydrophobic to Hydrophobic |
| T70 | 546-605 | Sentence | denotes | QKE45898 USA: CA P71L C-terminus Hydrophobic to Hydrophobic |
| T71 | 606-665 | Sentence | denotes | QKE45910 USA: CA P71L C-terminus Hydrophobic to Hydrophobic |
| T72 | 666-725 | Sentence | denotes | QJE38284 USA: CA P71L C-terminus Hydrophobic to Hydrophobic |
| T73 | 726-785 | Sentence | denotes | QIU81527 USA: WA P71L C-terminus Hydrophobic to Hydrophobic |
| T74 | 786-799 | Sentence | denotes | QKG87268 USA: |
| T75 | 800-856 | Sentence | denotes | Massachusetts S68F C-terminus Hydrophobic to Hydrophobic |
| T76 | 857-870 | Sentence | denotes | QKG88576 USA: |
| T77 | 871-927 | Sentence | denotes | Massachusetts S68F C-terminus Hydrophobic to Hydrophobic |
| T78 | 928-943 | Sentence | denotes | QKI36831 China: |
| T79 | 944-996 | Sentence | denotes | Guangzhou D72Y C-terminus Hydrophilic to Hydrophobic |
| T80 | 997-1012 | Sentence | denotes | QKI36855 China: |
| T81 | 1013-1065 | Sentence | denotes | Guangzhou S68C C-terminus Hydrophilic to Hydrophobic |
| T82 | 1066-1094 | Sentence | denotes | a TMD: transmembrane domain. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T172 | 40-49 | PG_2 | denotes | E-protein |
| T173 | 53-62 | SP_7 | denotes | SARS-CoV2 |
| T174 | 1073-1086 | GO:0016020 | denotes | transmembrane |
| T175 | 1087-1093 | SO:0000417 | denotes | domain |
| T33 | 1073-1086 | GO:0016020 | denotes | transmembrane |
| T34 | 1087-1093 | SO:0000417 | denotes | domain |
| T160 | 12-17 | NCBITaxon:10239 | denotes | syno |
| T161 | 51-54 | CHEBI:24870;CHEBI:24870 | denotes | f S |
| T162 | 79-87 | GO:0031975 | denotes | location |
| T163 | 351-356 | PR:000010546 | denotes | ic QJ |
| T164 | 360-365 | GO:0005794 | denotes | 03 Au |
| T165 | 423-434 | GO:0006260 | denotes | ic QKE45838 |
| T166 | 462-467 | NCBITaxon:10239 | denotes | ropho |
| T167 | 493-499 | SO:0000417 | denotes | 6 USA: |
| T168 | 507-517 | PG_2 | denotes | C-terminu |
| T169 | 521-530 | SP_7 | denotes | drophobic |
| T170 | 775-780 | CHEBI:24433;CHEBI:24433 | denotes | ydrop |
| T171 | 883-888 | CHEBI:24433;CHEBI:24433 | denotes | s S68 |
| T40836 | 1040-1051 | PG_2 | denotes | ydrophilic |
| T95722 | 1055-1064 | SP_7 | denotes | ydrophobi |
| T91530 | 1073-1086 | GO:0016020 | denotes | transmembrane |
| T22228 | 1087-1093 | SO:0000417 | denotes | domain |