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PMC:7318948 / 17582-18503 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T251 108-116 SP_7 denotes COVID-19
T252 154-159 UBERON:0000062 denotes organ
T253 184-188 PR:000001393 denotes IL-6
T254 189-198 CHEBI:35222;CHEBI:35222 denotes inhibitor
T255 298-309 DG_35 denotes tocilizumab
T256 386-397 UBERON:0001004 denotes respiratory
T257 563-574 UBERON:0001004 denotes respiratory
T258 600-614 GO:0007596 denotes Thromboembolic
T259 655-666 UBERON:0001004 denotes respiratory
T260 771-779 SP_7 denotes COVID-19
T261 800-805 UBERON:0000062 denotes organ
T262 889-897 SP_7 denotes COVID-19
T53081 108-116 SP_7 denotes COVID-19
T40237 154-159 UBERON:0000062 denotes organ
T50732 184-188 PR:000001393 denotes IL-6
T20616 189-198 CHEBI:35222;CHEBI:35222 denotes inhibitor
T9065 298-309 DG_35 denotes tocilizumab
T92411 386-397 UBERON:0001004 denotes respiratory
T9846 563-574 UBERON:0001004 denotes respiratory
T4781 600-614 GO:0007596 denotes Thromboembolic
T63580 655-666 UBERON:0001004 denotes respiratory
T70599 771-779 SP_7 denotes COVID-19
T64011 800-805 UBERON:0000062 denotes organ
T48557 889-897 SP_7 denotes COVID-19

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T94 148-159 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670
T95 411-419 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T96 794-805 Body_part denotes solid organ http://purl.org/sig/ont/fma/fma55670

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T52 154-159 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T53 800-805 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T88 108-116 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T89 386-405 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T90 655-674 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T91 771-779 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T92 889-897 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T220 154-159 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T221 317-318 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T222 442-443 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T223 525-526 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 645-646 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T225 676-677 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T226 800-805 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T185 184-186 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T187 189-198 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T188 298-309 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
434 184-188 Gene denotes IL-6 Gene:3569
435 117-125 Species denotes patients Tax:9606
436 206-213 Species denotes patient Tax:9606
437 350-357 Species denotes patient Tax:9606
438 464-472 Species denotes patients Tax:9606
439 780-788 Species denotes patients Tax:9606
440 298-309 Chemical denotes tocilizumab MESH:C502936
441 108-116 Disease denotes COVID-19 MESH:C000657245
442 386-405 Disease denotes respiratory failure MESH:D012131
443 563-583 Disease denotes respiratory distress MESH:D012128
444 600-624 Disease denotes Thromboembolic phenomena MESH:D013923
445 655-674 Disease denotes respiratory failure MESH:D012131
446 771-779 Disease denotes COVID-19 MESH:C000657245
447 889-897 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T37 386-405 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T38 411-425 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T39 563-583 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T40 600-614 Phenotype denotes Thromboembolic http://purl.obolibrary.org/obo/HP_0001907
T41 655-674 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T156 0-172 Sentence denotes In conclusion, there is limited data on the clinical presentation, management, and appropriate treatment of COVID-19 patients who are recipients of solid organ transplants.
T157 173-406 Sentence denotes The use of IL-6 inhibitor in our patient resulted in clinical improvement initially, but it is difficult to determine if the tocilizumab played a role in the management of this patient, specifically in preventing respiratory failure.
T158 407-599 Sentence denotes The cytokine storm appears to play a major role in these patients, and it is possible that several of them experience a second storm that results in severe respiratory distress and intubation.
T159 600-675 Sentence denotes Thromboembolic phenomena also appear to play a role in respiratory failure.
T160 676-818 Sentence denotes A single case does not represent the complex strategy needed when considering the treatment of COVID-19 patients with solid organ transplants.
T161 819-921 Sentence denotes Further studies are necessary to investigate treatment modalities for COVID-19 in special populations.