PMC:7311890 / 31185-31927 JSON TXT

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LitCovid_Glycan-Motif-Structure

{"project":"LitCovid_Glycan-Motif-Structure","denotations":[{"id":"T38","span":{"begin":408,"end":411},"obj":"https://glytoucan.org/Structures/Glycans/G56516VH"},{"id":"T39","span":{"begin":408,"end":411},"obj":"https://glytoucan.org/Structures/Glycans/G91237TK"},{"id":"T40","span":{"begin":492,"end":495},"obj":"https://glytoucan.org/Structures/Glycans/G56516VH"},{"id":"T41","span":{"begin":492,"end":495},"obj":"https://glytoucan.org/Structures/Glycans/G91237TK"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

LitCovid-PD-FMA-UBERON

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T235","span":{"begin":179,"end":181},"obj":"Body_part"},{"id":"T236","span":{"begin":655,"end":657},"obj":"Body_part"}],"attributes":[{"id":"A235","pred":"fma_id","subj":"T235","obj":"http://purl.org/sig/ont/fma/fma82781"},{"id":"A236","pred":"fma_id","subj":"T236","obj":"http://purl.org/sig/ont/fma/fma82781"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

LitCovid-PD-MONDO

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T147","span":{"begin":242,"end":250},"obj":"Disease"},{"id":"T148","span":{"begin":380,"end":388},"obj":"Disease"},{"id":"T149","span":{"begin":536,"end":544},"obj":"Disease"},{"id":"T150","span":{"begin":733,"end":741},"obj":"Disease"}],"attributes":[{"id":"A147","pred":"mondo_id","subj":"T147","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A148","pred":"mondo_id","subj":"T148","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A149","pred":"mondo_id","subj":"T149","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A150","pred":"mondo_id","subj":"T150","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

LitCovid-PD-CLO

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T280","span":{"begin":116,"end":118},"obj":"http://purl.obolibrary.org/obo/CLO_0008491"},{"id":"T281","span":{"begin":119,"end":121},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T282","span":{"begin":176,"end":178},"obj":"http://purl.obolibrary.org/obo/CLO_0008491"},{"id":"T283","span":{"begin":282,"end":286},"obj":"http://purl.obolibrary.org/obo/CLO_0054057"},{"id":"T284","span":{"begin":496,"end":498},"obj":"http://purl.obolibrary.org/obo/CLO_0008491"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

LitCovid-PD-CHEBI

LitCovid-PubTator

{"project":"LitCovid-PubTator","denotations":[{"id":"840","span":{"begin":608,"end":612},"obj":"Gene"},{"id":"849","span":{"begin":408,"end":411},"obj":"Chemical"},{"id":"850","span":{"begin":451,"end":454},"obj":"Chemical"},{"id":"851","span":{"begin":492,"end":495},"obj":"Chemical"},{"id":"852","span":{"begin":496,"end":498},"obj":"Chemical"},{"id":"872","span":{"begin":242,"end":250},"obj":"Disease"},{"id":"873","span":{"begin":380,"end":388},"obj":"Disease"},{"id":"874","span":{"begin":536,"end":544},"obj":"Disease"},{"id":"875","span":{"begin":733,"end":741},"obj":"Disease"}],"attributes":[{"id":"A840","pred":"tao:has_database_id","subj":"840","obj":"Gene:9933"},{"id":"A850","pred":"tao:has_database_id","subj":"850","obj":"MESH:D010718"},{"id":"A852","pred":"tao:has_database_id","subj":"852","obj":"MESH:D010718"},{"id":"A872","pred":"tao:has_database_id","subj":"872","obj":"MESH:C000657245"},{"id":"A873","pred":"tao:has_database_id","subj":"873","obj":"MESH:C000657245"},{"id":"A874","pred":"tao:has_database_id","subj":"874","obj":"MESH:C000657245"},{"id":"A875","pred":"tao:has_database_id","subj":"875","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

LitCovid-sentences

{"project":"LitCovid-sentences","denotations":[{"id":"T202","span":{"begin":0,"end":742},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

LitCovid-PMC-OGER-BB

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T671","span":{"begin":5,"end":12},"obj":"SO:0000417"},{"id":"T672","span":{"begin":80,"end":86},"obj":"GO:0007601"},{"id":"T673","span":{"begin":242,"end":250},"obj":"SP_7"},{"id":"T674","span":{"begin":273,"end":276},"obj":"PR:000000034"},{"id":"T675","span":{"begin":336,"end":339},"obj":"PR:000000034"},{"id":"T676","span":{"begin":380,"end":388},"obj":"SP_7"},{"id":"T677","span":{"begin":451,"end":454},"obj":"CHEBI:18303;CHEBI:18303"},{"id":"T678","span":{"begin":496,"end":498},"obj":"CHEBI:18303;CHEBI:18303"},{"id":"T679","span":{"begin":536,"end":544},"obj":"SP_7"},{"id":"T680","span":{"begin":733,"end":741},"obj":"SP_7"},{"id":"T70789","span":{"begin":92,"end":96},"obj":"CHEBI:17855;CHEBI:17855"},{"id":"T9683","span":{"begin":153,"end":157},"obj":"CHEBI:18059;CHEBI:18059"},{"id":"T67378","span":{"begin":256,"end":274},"obj":"CHEBI:37739;CHEBI:37739"},{"id":"T27644","span":{"begin":287,"end":291},"obj":"CHEBI:18059;CHEBI:18059"},{"id":"T66577","span":{"begin":302,"end":311},"obj":"CHEBI:26739;CHEBI:26739"},{"id":"T24198","span":{"begin":347,"end":350},"obj":"PR:Q9LZI2"},{"id":"T75245","span":{"begin":541,"end":546},"obj":"CHEBI:18059;CHEBI:18059"},{"id":"T19070","span":{"begin":606,"end":614},"obj":"GO:0070062"},{"id":"T98549","span":{"begin":615,"end":624},"obj":"GO:0016020"},{"id":"T53645","span":{"begin":724,"end":728},"obj":"CHEBI:17855;CHEBI:17855"}],"text":"Four modules (I–IV) of biological interest were circled and expanded for better visual clarity. (I) Module with hub PS 34:1 connected to numerous PEs by teal lines, indicating PS-PE positive correlations in healthy controls were lost in mild COVID-19. (II) Module with hub BMP 38:5(18:1/20:4) connected to CEs by blue lines, indicating BMP-CE correlations became negative in mild COVID-19. (III) Module with GM3 d18:0/25:0 as hub connected to several PSs by blue and purple lines, indicating GM3-PS correlations became negative in mild COVID-19. (IV) Module with LysoPC 16:1 as the hub connected to numerous PUFA-PEs by blue lines, indicating lysoPC-PUFA-PE correlations changed from positive in healthy controls to negative in mild COVID-19."}

PMC:7311890 / 31185-31927 JSONTXT

Annnotations TAB JSON ListView MergeView

PMC:7311890 / 31185-31927 JSON TXT