PMC:7306567 / 25785-26142 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T39","span":{"begin":75,"end":81},"obj":"Body_part"},{"id":"T40","span":{"begin":196,"end":202},"obj":"Body_part"}],"attributes":[{"id":"A39","pred":"fma_id","subj":"T39","obj":"http://purl.org/sig/ont/fma/fma312401"},{"id":"A40","pred":"fma_id","subj":"T40","obj":"http://purl.org/sig/ont/fma/fma312401"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T35","span":{"begin":75,"end":81},"obj":"Body_part"},{"id":"T36","span":{"begin":196,"end":202},"obj":"Body_part"}],"attributes":[{"id":"A35","pred":"uberon_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/UBERON_0007311"},{"id":"A36","pred":"uberon_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/UBERON_0007311"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PubTator","denotations":[{"id":"250","span":{"begin":107,"end":109},"obj":"Chemical"},{"id":"251","span":{"begin":173,"end":175},"obj":"Chemical"},{"id":"252","span":{"begin":227,"end":229},"obj":"Chemical"},{"id":"253","span":{"begin":319,"end":336},"obj":"Disease"}],"attributes":[{"id":"A250","pred":"tao:has_database_id","subj":"250","obj":"MESH:C012990"},{"id":"A251","pred":"tao:has_database_id","subj":"251","obj":"MESH:C012990"},{"id":"A252","pred":"tao:has_database_id","subj":"252","obj":"MESH:C012990"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T103","span":{"begin":319,"end":336},"obj":"Disease"}],"attributes":[{"id":"A103","pred":"mondo_id","subj":"T103","obj":"http://purl.obolibrary.org/obo/MONDO_0021925"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T170","span":{"begin":64,"end":65},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T171","span":{"begin":162,"end":163},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T172","span":{"begin":176,"end":184},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T173","span":{"begin":185,"end":186},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T174","span":{"begin":216,"end":217},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T175","span":{"begin":261,"end":262},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T176","span":{"begin":297,"end":298},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T177","span":{"begin":309,"end":315},"obj":"http://purl.obolibrary.org/obo/UBERON_0002553"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T176","span":{"begin":103,"end":106},"obj":"Chemical"},{"id":"T177","span":{"begin":107,"end":109},"obj":"Chemical"},{"id":"T179","span":{"begin":173,"end":175},"obj":"Chemical"},{"id":"T181","span":{"begin":227,"end":229},"obj":"Chemical"}],"attributes":[{"id":"A176","pred":"chebi_id","subj":"T176","obj":"http://purl.obolibrary.org/obo/CHEBI_64198"},{"id":"A177","pred":"chebi_id","subj":"T177","obj":"http://purl.obolibrary.org/obo/CHEBI_74120"},{"id":"A178","pred":"chebi_id","subj":"T177","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A179","pred":"chebi_id","subj":"T179","obj":"http://purl.obolibrary.org/obo/CHEBI_74120"},{"id":"A180","pred":"chebi_id","subj":"T179","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"},{"id":"A181","pred":"chebi_id","subj":"T181","obj":"http://purl.obolibrary.org/obo/CHEBI_74120"},{"id":"A182","pred":"chebi_id","subj":"T181","obj":"http://purl.obolibrary.org/obo/CHEBI_27680"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PD-GlycoEpitope","denotations":[{"id":"T23","span":{"begin":107,"end":109},"obj":"GlycoEpitope"},{"id":"T24","span":{"begin":173,"end":175},"obj":"GlycoEpitope"},{"id":"T25","span":{"begin":227,"end":229},"obj":"GlycoEpitope"}],"attributes":[{"id":"A23","pred":"glyco_epitope_db_id","subj":"T23","obj":"http://www.glycoepitope.jp/epitopes/EP0510"},{"id":"A24","pred":"glyco_epitope_db_id","subj":"T24","obj":"http://www.glycoepitope.jp/epitopes/EP0510"},{"id":"A25","pred":"glyco_epitope_db_id","subj":"T25","obj":"http://www.glycoepitope.jp/epitopes/EP0510"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-sentences","denotations":[{"id":"T192","span":{"begin":0,"end":110},"obj":"Sentence"},{"id":"T193","span":{"begin":111,"end":357},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T235","span":{"begin":75,"end":81},"obj":"UBERON:0007311"},{"id":"T236","span":{"begin":196,"end":202},"obj":"UBERON:0007311"},{"id":"T237","span":{"begin":299,"end":308},"obj":"UBERON:0002484"},{"id":"T238","span":{"begin":309,"end":315},"obj":"UBERON:0002224"},{"id":"T239","span":{"begin":319,"end":336},"obj":"UBERON:0007196"}],"text":"In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1)."}