PMC:7306567 / 25785-26142
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T39 | 75-81 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T40 | 196-202 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T35 | 75-81 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T36 | 196-202 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 250 | 107-109 | Chemical | denotes | GM | MESH:C012990 |
| 251 | 173-175 | Chemical | denotes | GM | MESH:C012990 |
| 252 | 227-229 | Chemical | denotes | GM | MESH:C012990 |
| 253 | 319-336 | Disease | denotes | tracheobronchitis |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T103 | 319-336 | Disease | denotes | tracheobronchitis | http://purl.obolibrary.org/obo/MONDO_0021925 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T170 | 64-65 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T171 | 162-163 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T172 | 176-184 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test, as |
| T173 | 185-186 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T174 | 216-217 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T175 | 261-262 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T176 | 297-298 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T177 | 309-315 | http://purl.obolibrary.org/obo/UBERON_0002553 | denotes | cavity |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T176 | 103-106 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
| T177 | 107-109 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
| T179 | 173-175 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
| T181 | 227-229 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T23 | 107-109 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
| T24 | 173-175 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
| T25 | 227-229 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T192 | 0-110 | Sentence | denotes | In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM. |
| T193 | 111-357 | Sentence | denotes | For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1). |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T235 | 75-81 | UBERON:0007311 | denotes | sputum |
| T236 | 196-202 | UBERON:0007311 | denotes | sputum |
| T237 | 299-308 | UBERON:0002484 | denotes | pulmonary |
| T238 | 309-315 | UBERON:0002224 | denotes | cavity |
| T239 | 319-336 | UBERON:0007196 | denotes | tracheobronchitis |