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PMC:7306567 / 25785-26142 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T39 75-81 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T40 196-202 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T35 75-81 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T36 196-202 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
250 107-109 Chemical denotes GM MESH:C012990
251 173-175 Chemical denotes GM MESH:C012990
252 227-229 Chemical denotes GM MESH:C012990
253 319-336 Disease denotes tracheobronchitis

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T103 319-336 Disease denotes tracheobronchitis http://purl.obolibrary.org/obo/MONDO_0021925

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T170 64-65 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T171 162-163 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T172 176-184 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test, as
T173 185-186 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T174 216-217 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T175 261-262 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T176 297-298 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T177 309-315 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavity

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T176 103-106 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T177 107-109 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T179 173-175 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T181 227-229 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T23 107-109 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T24 173-175 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T25 227-229 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T192 0-110 Sentence denotes In some patients, discordant results are obtained, for instance a positive sputum culture but negative BAL GM.
T193 111-357 Sentence denotes For most situations, IAPA classification relies on a positive GM test, as a positive sputum culture with a negative GM result would be interpreted as a lower probability of IAPA (unless a pulmonary cavity or tracheobronchitis is present)(Fig. 1).

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T235 75-81 UBERON:0007311 denotes sputum
T236 196-202 UBERON:0007311 denotes sputum
T237 299-308 UBERON:0002484 denotes pulmonary
T238 309-315 UBERON:0002224 denotes cavity
T239 319-336 UBERON:0007196 denotes tracheobronchitis